Protein–RNA interactions for Protein: Q8NF37

LPCAT1, Lysophosphatidylcholine acyltransferase 1, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1Q8NF37 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LPCAT1Q8NF37 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LPCAT1Q8NF37 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.69■□□□□ 0.42
LPCAT1Q8NF37 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LPCAT1Q8NF37 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LPCAT1Q8NF37 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LPCAT1Q8NF37 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LPCAT1Q8NF37 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LPCAT1Q8NF37 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC17.69■□□□□ 0.42
LPCAT1Q8NF37 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.69■□□□□ 0.42
LPCAT1Q8NF37 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.69■□□□□ 0.42
LPCAT1Q8NF37 AC132008.2-207ENST00000454517 770 ntBASIC17.69■□□□□ 0.42
LPCAT1Q8NF37 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.69■□□□□ 0.42
LPCAT1Q8NF37 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LPCAT1Q8NF37 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.69■□□□□ 0.42
LPCAT1Q8NF37 IFNL4P1-201ENST00000607083 540 ntBASIC17.69■□□□□ 0.42
LPCAT1Q8NF37 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
LPCAT1Q8NF37 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.69■□□□□ 0.42
LPCAT1Q8NF37 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LPCAT1Q8NF37 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LPCAT1Q8NF37 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LPCAT1Q8NF37 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.69■□□□□ 0.42
LPCAT1Q8NF37 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LPCAT1Q8NF37 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LPCAT1Q8NF37 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LPCAT1Q8NF37 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.69■□□□□ 0.42
LPCAT1Q8NF37 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
LPCAT1Q8NF37 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LPCAT1Q8NF37 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LPCAT1Q8NF37 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LPCAT1Q8NF37 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
LPCAT1Q8NF37 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
LPCAT1Q8NF37 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.68■□□□□ 0.42
LPCAT1Q8NF37 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.68■□□□□ 0.42
LPCAT1Q8NF37 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC17.68■□□□□ 0.42
LPCAT1Q8NF37 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
LPCAT1Q8NF37 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LPCAT1Q8NF37 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LPCAT1Q8NF37 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LPCAT1Q8NF37 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LPCAT1Q8NF37 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
LPCAT1Q8NF37 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
LPCAT1Q8NF37 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.68■□□□□ 0.42
LPCAT1Q8NF37 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.68■□□□□ 0.42
LPCAT1Q8NF37 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC17.68■□□□□ 0.42
LPCAT1Q8NF37 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.68■□□□□ 0.42
LPCAT1Q8NF37 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.68■□□□□ 0.42
LPCAT1Q8NF37 TOLLIP-AS1-201ENST00000530897 939 ntBASIC17.68■□□□□ 0.42
LPCAT1Q8NF37 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.68■□□□□ 0.42
LPCAT1Q8NF37 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC17.68■□□□□ 0.42
LPCAT1Q8NF37 LINC01711-201ENST00000598340 967 ntBASIC17.68■□□□□ 0.42
LPCAT1Q8NF37 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LPCAT1Q8NF37 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
LPCAT1Q8NF37 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.68■□□□□ 0.42
LPCAT1Q8NF37 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.68■□□□□ 0.42
LPCAT1Q8NF37 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LPCAT1Q8NF37 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.68■□□□□ 0.42
LPCAT1Q8NF37 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.68■□□□□ 0.42
LPCAT1Q8NF37 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LPCAT1Q8NF37 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.68■□□□□ 0.42
LPCAT1Q8NF37 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.67■□□□□ 0.42
LPCAT1Q8NF37 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LPCAT1Q8NF37 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LPCAT1Q8NF37 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LPCAT1Q8NF37 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
LPCAT1Q8NF37 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LPCAT1Q8NF37 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.67■□□□□ 0.42
LPCAT1Q8NF37 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LPCAT1Q8NF37 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LPCAT1Q8NF37 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LPCAT1Q8NF37 EMD-201ENST00000369835 966 ntTSL 3 BASIC17.67■□□□□ 0.42
LPCAT1Q8NF37 LSM5-204ENST00000409909 740 ntTSL 2 BASIC17.67■□□□□ 0.42
LPCAT1Q8NF37 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LPCAT1Q8NF37 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.67■□□□□ 0.42
LPCAT1Q8NF37 ABCD1P5-201ENST00000445663 754 ntBASIC17.67■□□□□ 0.42
LPCAT1Q8NF37 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.67■□□□□ 0.42
LPCAT1Q8NF37 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LPCAT1Q8NF37 AD001527.2-201ENST00000622994 785 ntBASIC17.67■□□□□ 0.42
LPCAT1Q8NF37 AC073592.5-201ENST00000624854 528 ntBASIC17.67■□□□□ 0.42
LPCAT1Q8NF37 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC17.67■□□□□ 0.42
LPCAT1Q8NF37 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
LPCAT1Q8NF37 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LPCAT1Q8NF37 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LPCAT1Q8NF37 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
LPCAT1Q8NF37 AL353593.2-201ENST00000602529 1483 ntBASIC17.67■□□□□ 0.42
LPCAT1Q8NF37 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LPCAT1Q8NF37 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.67■□□□□ 0.42
LPCAT1Q8NF37 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.67■□□□□ 0.42
LPCAT1Q8NF37 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
LPCAT1Q8NF37 FUT8-AS1-201ENST00000621019 1521 ntBASIC17.67■□□□□ 0.42
LPCAT1Q8NF37 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LPCAT1Q8NF37 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LPCAT1Q8NF37 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
LPCAT1Q8NF37 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
LPCAT1Q8NF37 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
LPCAT1Q8NF37 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.66■□□□□ 0.42
LPCAT1Q8NF37 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
LPCAT1Q8NF37 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LPCAT1Q8NF37 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LPCAT1Q8NF37 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms