Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 RCN1P2-201ENST00000398357 915 ntBASIC15.36■□□□□ 0.05
CPEB3Q8NE35 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
CPEB3Q8NE35 AC005104.2-201ENST00000427818 678 ntBASIC15.36■□□□□ 0.05
CPEB3Q8NE35 AC122714.2-201ENST00000502787 707 ntBASIC15.36■□□□□ 0.05
CPEB3Q8NE35 AC096582.2-201ENST00000510860 516 ntBASIC15.36■□□□□ 0.05
CPEB3Q8NE35 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC15.36■□□□□ 0.05
CPEB3Q8NE35 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.36■□□□□ 0.05
CPEB3Q8NE35 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC15.36■□□□□ 0.05
CPEB3Q8NE35 METTL23-204ENST00000586752 904 ntTSL 2 BASIC15.36■□□□□ 0.05
CPEB3Q8NE35 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
CPEB3Q8NE35 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
CPEB3Q8NE35 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.36■□□□□ 0.05
CPEB3Q8NE35 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CPEB3Q8NE35 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
CPEB3Q8NE35 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.36■□□□□ 0.05
CPEB3Q8NE35 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
CPEB3Q8NE35 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CPEB3Q8NE35 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
CPEB3Q8NE35 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC15.35■□□□□ 0.05
CPEB3Q8NE35 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
CPEB3Q8NE35 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CPEB3Q8NE35 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
CPEB3Q8NE35 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC15.35■□□□□ 0.05
CPEB3Q8NE35 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.35■□□□□ 0.05
CPEB3Q8NE35 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
CPEB3Q8NE35 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC15.35■□□□□ 0.05
CPEB3Q8NE35 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC15.35■□□□□ 0.05
CPEB3Q8NE35 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CPEB3Q8NE35 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CPEB3Q8NE35 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.35■□□□□ 0.05
CPEB3Q8NE35 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
CPEB3Q8NE35 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CPEB3Q8NE35 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.35■□□□□ 0.05
CPEB3Q8NE35 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC15.35■□□□□ 0.05
CPEB3Q8NE35 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC15.35■□□□□ 0.05
CPEB3Q8NE35 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
CPEB3Q8NE35 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CPEB3Q8NE35 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
CPEB3Q8NE35 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.35■□□□□ 0.05
CPEB3Q8NE35 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CPEB3Q8NE35 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC15.35■□□□□ 0.05
CPEB3Q8NE35 PP12613-201ENST00000424958 2230 ntBASIC15.35■□□□□ 0.05
CPEB3Q8NE35 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
CPEB3Q8NE35 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
CPEB3Q8NE35 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CPEB3Q8NE35 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CPEB3Q8NE35 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CPEB3Q8NE35 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CPEB3Q8NE35 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CPEB3Q8NE35 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CPEB3Q8NE35 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.34■□□□□ 0.05
CPEB3Q8NE35 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
CPEB3Q8NE35 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.34■□□□□ 0.05
CPEB3Q8NE35 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CPEB3Q8NE35 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CPEB3Q8NE35 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CPEB3Q8NE35 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CPEB3Q8NE35 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CPEB3Q8NE35 POM121L3P-201ENST00000419331 1163 ntBASIC15.34■□□□□ 0.05
CPEB3Q8NE35 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CPEB3Q8NE35 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC15.34■□□□□ 0.05
CPEB3Q8NE35 MIR3652-201ENST00000579335 131 ntBASIC15.34■□□□□ 0.05
CPEB3Q8NE35 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC15.34■□□□□ 0.05
CPEB3Q8NE35 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CPEB3Q8NE35 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CPEB3Q8NE35 AC019129.2-201ENST00000609837 1235 ntBASIC15.34■□□□□ 0.05
CPEB3Q8NE35 CCNC-219ENST00000627680 896 ntTSL 5 BASIC15.34■□□□□ 0.05
CPEB3Q8NE35 INTS4P1-201ENST00000438455 1935 ntBASIC15.34■□□□□ 0.05
CPEB3Q8NE35 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.34■□□□□ 0.05
CPEB3Q8NE35 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CPEB3Q8NE35 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.34■□□□□ 0.05
CPEB3Q8NE35 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CPEB3Q8NE35 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CPEB3Q8NE35 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.34■□□□□ 0.05
CPEB3Q8NE35 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CPEB3Q8NE35 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CPEB3Q8NE35 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CPEB3Q8NE35 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC15.33■□□□□ 0.05
CPEB3Q8NE35 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CPEB3Q8NE35 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CPEB3Q8NE35 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CPEB3Q8NE35 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CPEB3Q8NE35 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.33■□□□□ 0.04
CPEB3Q8NE35 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
CPEB3Q8NE35 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CPEB3Q8NE35 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CPEB3Q8NE35 CROCCP1-201ENST00000426910 5675 ntBASIC15.33■□□□□ 0.04
CPEB3Q8NE35 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CPEB3Q8NE35 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CPEB3Q8NE35 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CPEB3Q8NE35 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CPEB3Q8NE35 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.33■□□□□ 0.04
CPEB3Q8NE35 FOSL1P1-201ENST00000511041 816 ntBASIC15.33■□□□□ 0.04
CPEB3Q8NE35 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CPEB3Q8NE35 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC15.33■□□□□ 0.04
CPEB3Q8NE35 AC138894.3-201ENST00000603787 634 ntBASIC15.33■□□□□ 0.04
CPEB3Q8NE35 AC114341.1-201ENST00000618070 349 ntBASIC15.33■□□□□ 0.04
CPEB3Q8NE35 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.33■□□□□ 0.04
CPEB3Q8NE35 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CPEB3Q8NE35 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms