Protein–RNA interactions for Protein: Q8ND23

CARMIL3, Capping protein, Arp2/3 and myosin-I linker protein 3, humanhuman

Predictions only

Length 1,372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3Q8ND23 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC21.82■■□□□ 1.08
CARMIL3Q8ND23 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.82■■□□□ 1.08
CARMIL3Q8ND23 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
CARMIL3Q8ND23 CD99-202ENST00000381180 530 ntTSL 2 BASIC21.82■■□□□ 1.08
CARMIL3Q8ND23 REXO1L3P-201ENST00000622202 1288 ntBASIC21.82■■□□□ 1.08
CARMIL3Q8ND23 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CARMIL3Q8ND23 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
CARMIL3Q8ND23 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CARMIL3Q8ND23 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CARMIL3Q8ND23 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CARMIL3Q8ND23 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CARMIL3Q8ND23 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CARMIL3Q8ND23 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC21.81■■□□□ 1.08
CARMIL3Q8ND23 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CARMIL3Q8ND23 PTMS-202ENST00000389462 773 ntTSL 2 BASIC21.81■■□□□ 1.08
CARMIL3Q8ND23 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CARMIL3Q8ND23 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CARMIL3Q8ND23 TK1-204ENST00000590430 683 ntTSL 3 BASIC21.81■■□□□ 1.08
CARMIL3Q8ND23 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
CARMIL3Q8ND23 AL390955.2-201ENST00000603032 514 ntBASIC21.81■■□□□ 1.08
CARMIL3Q8ND23 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
CARMIL3Q8ND23 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CARMIL3Q8ND23 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC21.81■■□□□ 1.08
CARMIL3Q8ND23 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC21.81■■□□□ 1.08
CARMIL3Q8ND23 AL590787.1-201ENST00000568856 1315 ntBASIC21.81■■□□□ 1.08
CARMIL3Q8ND23 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
CARMIL3Q8ND23 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
CARMIL3Q8ND23 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
CARMIL3Q8ND23 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
CARMIL3Q8ND23 POR-209ENST00000439269 1858 ntTSL 2 BASIC21.8■■□□□ 1.08
CARMIL3Q8ND23 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CARMIL3Q8ND23 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CARMIL3Q8ND23 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CARMIL3Q8ND23 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CARMIL3Q8ND23 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
CARMIL3Q8ND23 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
CARMIL3Q8ND23 WBP2-203ENST00000433525 928 ntTSL 2 BASIC21.8■■□□□ 1.08
CARMIL3Q8ND23 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC21.8■■□□□ 1.08
CARMIL3Q8ND23 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC21.8■■□□□ 1.08
CARMIL3Q8ND23 AC023141.5-201ENST00000458585 616 ntBASIC21.8■■□□□ 1.08
CARMIL3Q8ND23 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CARMIL3Q8ND23 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC21.8■■□□□ 1.08
CARMIL3Q8ND23 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC21.8■■□□□ 1.08
CARMIL3Q8ND23 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CARMIL3Q8ND23 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CARMIL3Q8ND23 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CARMIL3Q8ND23 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CARMIL3Q8ND23 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CARMIL3Q8ND23 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CARMIL3Q8ND23 AC006116.8-202ENST00000587620 1550 ntBASIC21.8■■□□□ 1.08
CARMIL3Q8ND23 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
CARMIL3Q8ND23 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC21.8■■□□□ 1.08
CARMIL3Q8ND23 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
CARMIL3Q8ND23 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CARMIL3Q8ND23 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CARMIL3Q8ND23 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CARMIL3Q8ND23 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CARMIL3Q8ND23 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.79■■□□□ 1.08
CARMIL3Q8ND23 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC21.79■■□□□ 1.08
CARMIL3Q8ND23 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CARMIL3Q8ND23 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
CARMIL3Q8ND23 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
CARMIL3Q8ND23 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC21.79■■□□□ 1.08
CARMIL3Q8ND23 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
CARMIL3Q8ND23 HLA-J-203ENST00000494367 1087 ntBASIC21.79■■□□□ 1.08
CARMIL3Q8ND23 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC21.79■■□□□ 1.08
CARMIL3Q8ND23 AC004449.1-201ENST00000564240 433 ntBASIC21.79■■□□□ 1.08
CARMIL3Q8ND23 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC21.79■■□□□ 1.08
CARMIL3Q8ND23 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CARMIL3Q8ND23 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC21.79■■□□□ 1.08
CARMIL3Q8ND23 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC21.79■■□□□ 1.08
CARMIL3Q8ND23 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC21.79■■□□□ 1.08
CARMIL3Q8ND23 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC21.79■■□□□ 1.08
CARMIL3Q8ND23 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
CARMIL3Q8ND23 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC21.79■■□□□ 1.08
CARMIL3Q8ND23 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
CARMIL3Q8ND23 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
CARMIL3Q8ND23 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CARMIL3Q8ND23 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
CARMIL3Q8ND23 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC21.78■■□□□ 1.08
CARMIL3Q8ND23 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CARMIL3Q8ND23 AL121761.2-201ENST00000598007 1648 ntBASIC21.78■■□□□ 1.08
CARMIL3Q8ND23 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC21.78■■□□□ 1.08
CARMIL3Q8ND23 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CARMIL3Q8ND23 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC21.78■■□□□ 1.08
CARMIL3Q8ND23 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC21.78■■□□□ 1.08
CARMIL3Q8ND23 PAWRP1-201ENST00000451083 565 ntBASIC21.78■■□□□ 1.08
CARMIL3Q8ND23 GREM1-201ENST00000560677 623 ntTSL 4 BASIC21.78■■□□□ 1.08
CARMIL3Q8ND23 AC093520.2-201ENST00000561830 333 ntBASIC21.78■■□□□ 1.08
CARMIL3Q8ND23 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC21.78■■□□□ 1.08
CARMIL3Q8ND23 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC21.78■■□□□ 1.08
CARMIL3Q8ND23 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
CARMIL3Q8ND23 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC21.78■■□□□ 1.08
CARMIL3Q8ND23 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC21.78■■□□□ 1.08
CARMIL3Q8ND23 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
CARMIL3Q8ND23 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
CARMIL3Q8ND23 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CARMIL3Q8ND23 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
CARMIL3Q8ND23 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC21.77■■□□□ 1.08
CARMIL3Q8ND23 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC21.77■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms