Protein–RNA interactions for Protein: Q8NBP7

PCSK9, Proprotein convertase subtilisin/kexin type 9, humanhuman

Known RBP Predictions only

Length 692 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK9Q8NBP7 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCSK9Q8NBP7 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCSK9Q8NBP7 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCSK9Q8NBP7 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCSK9Q8NBP7 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCSK9Q8NBP7 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCSK9Q8NBP7 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCSK9Q8NBP7 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCSK9Q8NBP7 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCSK9Q8NBP7 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCSK9Q8NBP7 AL355306.1-201ENST00000415580 579 ntBASIC19.2■□□□□ 0.66
PCSK9Q8NBP7 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.2■□□□□ 0.66
PCSK9Q8NBP7 SPDYE11-202ENST00000450699 704 ntBASIC19.2■□□□□ 0.66
PCSK9Q8NBP7 SLBP-205ENST00000488267 987 ntTSL 2 BASIC19.2■□□□□ 0.66
PCSK9Q8NBP7 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCSK9Q8NBP7 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCSK9Q8NBP7 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCSK9Q8NBP7 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC19.2■□□□□ 0.66
PCSK9Q8NBP7 SPDYE9P-201ENST00000570642 692 ntBASIC19.2■□□□□ 0.66
PCSK9Q8NBP7 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC19.2■□□□□ 0.66
PCSK9Q8NBP7 SPDYE10P-202ENST00000612005 668 ntBASIC19.2■□□□□ 0.66
PCSK9Q8NBP7 SPDYE8P-202ENST00000612377 668 ntBASIC19.2■□□□□ 0.66
PCSK9Q8NBP7 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCSK9Q8NBP7 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCSK9Q8NBP7 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
PCSK9Q8NBP7 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCSK9Q8NBP7 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC19.2■□□□□ 0.66
PCSK9Q8NBP7 AMT-250ENST00000637682 1823 ntTSL 5 BASIC19.2■□□□□ 0.66
PCSK9Q8NBP7 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCSK9Q8NBP7 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
PCSK9Q8NBP7 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCSK9Q8NBP7 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC19.2■□□□□ 0.66
PCSK9Q8NBP7 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
PCSK9Q8NBP7 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCSK9Q8NBP7 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCSK9Q8NBP7 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
PCSK9Q8NBP7 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCSK9Q8NBP7 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
PCSK9Q8NBP7 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCSK9Q8NBP7 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCSK9Q8NBP7 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCSK9Q8NBP7 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
PCSK9Q8NBP7 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCSK9Q8NBP7 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCSK9Q8NBP7 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCSK9Q8NBP7 AC005237.2-201ENST00000434368 219 ntBASIC19.19■□□□□ 0.66
PCSK9Q8NBP7 AC140658.5-201ENST00000438532 169 ntBASIC19.19■□□□□ 0.66
PCSK9Q8NBP7 AC087163.2-201ENST00000457299 853 ntBASIC19.19■□□□□ 0.66
PCSK9Q8NBP7 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC19.19■□□□□ 0.66
PCSK9Q8NBP7 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC19.19■□□□□ 0.66
PCSK9Q8NBP7 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCSK9Q8NBP7 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC19.19■□□□□ 0.66
PCSK9Q8NBP7 MIR4745-201ENST00000577608 62 ntBASIC19.19■□□□□ 0.66
PCSK9Q8NBP7 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.19■□□□□ 0.66
PCSK9Q8NBP7 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC19.19■□□□□ 0.66
PCSK9Q8NBP7 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC19.19■□□□□ 0.66
PCSK9Q8NBP7 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.19■□□□□ 0.66
PCSK9Q8NBP7 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCSK9Q8NBP7 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC19.19■□□□□ 0.66
PCSK9Q8NBP7 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
PCSK9Q8NBP7 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
PCSK9Q8NBP7 KRT18P55-202ENST00000578578 1546 ntBASIC19.19■□□□□ 0.66
PCSK9Q8NBP7 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.19■□□□□ 0.66
PCSK9Q8NBP7 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
PCSK9Q8NBP7 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.19■□□□□ 0.66
PCSK9Q8NBP7 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCSK9Q8NBP7 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCSK9Q8NBP7 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCSK9Q8NBP7 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.18■□□□□ 0.66
PCSK9Q8NBP7 AP000997.3-201ENST00000623333 2250 ntBASIC19.18■□□□□ 0.66
PCSK9Q8NBP7 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.18■□□□□ 0.66
PCSK9Q8NBP7 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCSK9Q8NBP7 REXO1L9P-201ENST00000604264 2108 ntBASIC19.18■□□□□ 0.66
PCSK9Q8NBP7 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC19.18■□□□□ 0.66
PCSK9Q8NBP7 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCSK9Q8NBP7 CYP51A1P2-201ENST00000419457 1499 ntBASIC19.18■□□□□ 0.66
PCSK9Q8NBP7 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCSK9Q8NBP7 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC19.18■□□□□ 0.66
PCSK9Q8NBP7 SLC25A6P2-201ENST00000497974 877 ntBASIC19.18■□□□□ 0.66
PCSK9Q8NBP7 AC093520.2-201ENST00000561830 333 ntBASIC19.18■□□□□ 0.66
PCSK9Q8NBP7 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC19.18■□□□□ 0.66
PCSK9Q8NBP7 AC138761.1-201ENST00000584393 385 ntBASIC19.18■□□□□ 0.66
PCSK9Q8NBP7 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC19.18■□□□□ 0.66
PCSK9Q8NBP7 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC19.18■□□□□ 0.66
PCSK9Q8NBP7 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC19.18■□□□□ 0.66
PCSK9Q8NBP7 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCSK9Q8NBP7 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC19.18■□□□□ 0.66
PCSK9Q8NBP7 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCSK9Q8NBP7 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCSK9Q8NBP7 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCSK9Q8NBP7 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCSK9Q8NBP7 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.18■□□□□ 0.66
PCSK9Q8NBP7 WIZP1-201ENST00000531444 2299 ntBASIC19.18■□□□□ 0.66
PCSK9Q8NBP7 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCSK9Q8NBP7 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCSK9Q8NBP7 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCSK9Q8NBP7 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCSK9Q8NBP7 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
PCSK9Q8NBP7 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCSK9Q8NBP7 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms