Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
SYNPOQ8N3V7 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
SYNPOQ8N3V7 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
SYNPOQ8N3V7 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SYNPOQ8N3V7 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SYNPOQ8N3V7 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.76■□□□□ 0.43
SYNPOQ8N3V7 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
SYNPOQ8N3V7 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SYNPOQ8N3V7 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
SYNPOQ8N3V7 RHOQP3-201ENST00000437982 621 ntBASIC17.76■□□□□ 0.43
SYNPOQ8N3V7 AL078644.1-201ENST00000609881 752 ntBASIC17.76■□□□□ 0.43
SYNPOQ8N3V7 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SYNPOQ8N3V7 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SYNPOQ8N3V7 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.76■□□□□ 0.43
SYNPOQ8N3V7 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SYNPOQ8N3V7 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SYNPOQ8N3V7 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.76■□□□□ 0.43
SYNPOQ8N3V7 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SYNPOQ8N3V7 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SYNPOQ8N3V7 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SYNPOQ8N3V7 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SYNPOQ8N3V7 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SYNPOQ8N3V7 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SYNPOQ8N3V7 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.75■□□□□ 0.43
SYNPOQ8N3V7 NOC2LP1-202ENST00000452600 2235 ntBASIC17.75■□□□□ 0.43
SYNPOQ8N3V7 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SYNPOQ8N3V7 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SYNPOQ8N3V7 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
SYNPOQ8N3V7 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SYNPOQ8N3V7 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SYNPOQ8N3V7 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SYNPOQ8N3V7 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SYNPOQ8N3V7 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SYNPOQ8N3V7 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SYNPOQ8N3V7 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.75■□□□□ 0.43
SYNPOQ8N3V7 AP000344.2-201ENST00000512987 629 ntBASIC17.75■□□□□ 0.43
SYNPOQ8N3V7 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC17.75■□□□□ 0.43
SYNPOQ8N3V7 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC17.75■□□□□ 0.43
SYNPOQ8N3V7 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.75■□□□□ 0.43
SYNPOQ8N3V7 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC17.75■□□□□ 0.43
SYNPOQ8N3V7 STK25P1-201ENST00000585406 838 ntBASIC17.75■□□□□ 0.43
SYNPOQ8N3V7 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.75■□□□□ 0.43
SYNPOQ8N3V7 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.75■□□□□ 0.43
SYNPOQ8N3V7 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC17.75■□□□□ 0.43
SYNPOQ8N3V7 AC019129.2-201ENST00000609837 1235 ntBASIC17.75■□□□□ 0.43
SYNPOQ8N3V7 AC004877.2-201ENST00000623941 599 ntBASIC17.75■□□□□ 0.43
SYNPOQ8N3V7 AC007064.4-201ENST00000637740 555 ntBASIC17.75■□□□□ 0.43
SYNPOQ8N3V7 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.75■□□□□ 0.43
SYNPOQ8N3V7 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SYNPOQ8N3V7 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SYNPOQ8N3V7 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SYNPOQ8N3V7 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SYNPOQ8N3V7 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SYNPOQ8N3V7 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
SYNPOQ8N3V7 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SYNPOQ8N3V7 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.75■□□□□ 0.43
SYNPOQ8N3V7 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SYNPOQ8N3V7 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.75■□□□□ 0.43
SYNPOQ8N3V7 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SYNPOQ8N3V7 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SYNPOQ8N3V7 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SYNPOQ8N3V7 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SYNPOQ8N3V7 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
SYNPOQ8N3V7 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SYNPOQ8N3V7 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.74■□□□□ 0.43
SYNPOQ8N3V7 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SYNPOQ8N3V7 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SYNPOQ8N3V7 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SYNPOQ8N3V7 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SYNPOQ8N3V7 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SYNPOQ8N3V7 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SYNPOQ8N3V7 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.74■□□□□ 0.43
SYNPOQ8N3V7 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.74■□□□□ 0.43
SYNPOQ8N3V7 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.74■□□□□ 0.43
SYNPOQ8N3V7 IGLL3P-201ENST00000412472 434 ntBASIC17.74■□□□□ 0.43
SYNPOQ8N3V7 STK19B-204ENST00000512515 211 ntBASIC17.74■□□□□ 0.43
SYNPOQ8N3V7 IGHV3-52-201ENST00000519770 353 ntBASIC17.74■□□□□ 0.43
SYNPOQ8N3V7 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC17.74■□□□□ 0.43
SYNPOQ8N3V7 AC092364.2-202ENST00000597012 1073 ntBASIC17.74■□□□□ 0.43
SYNPOQ8N3V7 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC17.74■□□□□ 0.43
SYNPOQ8N3V7 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.74■□□□□ 0.43
SYNPOQ8N3V7 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
SYNPOQ8N3V7 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SYNPOQ8N3V7 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SYNPOQ8N3V7 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.74■□□□□ 0.43
SYNPOQ8N3V7 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SYNPOQ8N3V7 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.74■□□□□ 0.43
SYNPOQ8N3V7 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
SYNPOQ8N3V7 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
SYNPOQ8N3V7 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.74■□□□□ 0.43
SYNPOQ8N3V7 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
SYNPOQ8N3V7 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
SYNPOQ8N3V7 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
SYNPOQ8N3V7 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SYNPOQ8N3V7 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.73■□□□□ 0.43
SYNPOQ8N3V7 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SYNPOQ8N3V7 AC073592.3-201ENST00000625118 1834 ntBASIC17.73■□□□□ 0.43
SYNPOQ8N3V7 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SYNPOQ8N3V7 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
SYNPOQ8N3V7 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms