Protein–RNA interactions for Protein: Q8N112

LSMEM2, Leucine-rich single-pass membrane protein 2, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM2Q8N112 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
LSMEM2Q8N112 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.55■□□□□ 0.4
LSMEM2Q8N112 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LSMEM2Q8N112 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC17.55■□□□□ 0.4
LSMEM2Q8N112 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LSMEM2Q8N112 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LSMEM2Q8N112 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.55■□□□□ 0.4
LSMEM2Q8N112 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LSMEM2Q8N112 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
LSMEM2Q8N112 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LSMEM2Q8N112 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSMEM2Q8N112 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
LSMEM2Q8N112 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSMEM2Q8N112 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSMEM2Q8N112 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSMEM2Q8N112 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LSMEM2Q8N112 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
LSMEM2Q8N112 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.54■□□□□ 0.4
LSMEM2Q8N112 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.54■□□□□ 0.4
LSMEM2Q8N112 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSMEM2Q8N112 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.54■□□□□ 0.4
LSMEM2Q8N112 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LSMEM2Q8N112 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
LSMEM2Q8N112 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSMEM2Q8N112 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSMEM2Q8N112 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LSMEM2Q8N112 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSMEM2Q8N112 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.54■□□□□ 0.4
LSMEM2Q8N112 KRT18P67-201ENST00000432816 1264 ntBASIC17.54■□□□□ 0.4
LSMEM2Q8N112 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.54■□□□□ 0.4
LSMEM2Q8N112 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSMEM2Q8N112 RNPS1P1-201ENST00000507437 918 ntBASIC17.54■□□□□ 0.4
LSMEM2Q8N112 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.54■□□□□ 0.4
LSMEM2Q8N112 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.54■□□□□ 0.4
LSMEM2Q8N112 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LSMEM2Q8N112 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.54■□□□□ 0.4
LSMEM2Q8N112 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSMEM2Q8N112 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSMEM2Q8N112 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LSMEM2Q8N112 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.54■□□□□ 0.4
LSMEM2Q8N112 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.54■□□□□ 0.4
LSMEM2Q8N112 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LSMEM2Q8N112 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
LSMEM2Q8N112 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LSMEM2Q8N112 AC084018.2-201ENST00000613093 2607 ntBASIC17.53■□□□□ 0.4
LSMEM2Q8N112 AC011270.2-201ENST00000624293 2550 ntBASIC17.53■□□□□ 0.4
LSMEM2Q8N112 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC17.53■□□□□ 0.4
LSMEM2Q8N112 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LSMEM2Q8N112 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LSMEM2Q8N112 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LSMEM2Q8N112 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LSMEM2Q8N112 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LSMEM2Q8N112 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LSMEM2Q8N112 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
LSMEM2Q8N112 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
LSMEM2Q8N112 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LSMEM2Q8N112 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.53■□□□□ 0.4
LSMEM2Q8N112 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.53■□□□□ 0.4
LSMEM2Q8N112 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LSMEM2Q8N112 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LSMEM2Q8N112 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LSMEM2Q8N112 MED22-202ENST00000371999 987 ntTSL 3 BASIC17.53■□□□□ 0.4
LSMEM2Q8N112 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.53■□□□□ 0.4
LSMEM2Q8N112 AL031284.1-201ENST00000419297 478 ntBASIC17.53■□□□□ 0.4
LSMEM2Q8N112 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LSMEM2Q8N112 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
LSMEM2Q8N112 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
LSMEM2Q8N112 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
LSMEM2Q8N112 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
LSMEM2Q8N112 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.53■□□□□ 0.4
LSMEM2Q8N112 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
LSMEM2Q8N112 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
LSMEM2Q8N112 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.53■□□□□ 0.4
LSMEM2Q8N112 AL353692.3-201ENST00000407031 1396 ntBASIC17.53■□□□□ 0.4
LSMEM2Q8N112 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
LSMEM2Q8N112 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
LSMEM2Q8N112 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LSMEM2Q8N112 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LSMEM2Q8N112 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LSMEM2Q8N112 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.52■□□□□ 0.4
LSMEM2Q8N112 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
LSMEM2Q8N112 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
LSMEM2Q8N112 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LSMEM2Q8N112 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LSMEM2Q8N112 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
LSMEM2Q8N112 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
LSMEM2Q8N112 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.52■□□□□ 0.4
LSMEM2Q8N112 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.52■□□□□ 0.4
LSMEM2Q8N112 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.52■□□□□ 0.4
LSMEM2Q8N112 AL591684.3-201ENST00000605187 298 ntBASIC17.52■□□□□ 0.4
LSMEM2Q8N112 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
LSMEM2Q8N112 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
LSMEM2Q8N112 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.52■□□□□ 0.4
LSMEM2Q8N112 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
LSMEM2Q8N112 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LSMEM2Q8N112 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LSMEM2Q8N112 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LSMEM2Q8N112 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC17.52■□□□□ 0.39
LSMEM2Q8N112 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
LSMEM2Q8N112 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms