Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
COL27A1Q8IZC6 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL27A1Q8IZC6 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC16.31■□□□□ 0.2
COL27A1Q8IZC6 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COL27A1Q8IZC6 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL27A1Q8IZC6 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC16.31■□□□□ 0.2
COL27A1Q8IZC6 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COL27A1Q8IZC6 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL27A1Q8IZC6 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.31■□□□□ 0.2
COL27A1Q8IZC6 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.31■□□□□ 0.2
COL27A1Q8IZC6 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL27A1Q8IZC6 DUX4L27-201ENST00000554796 1261 ntBASIC16.31■□□□□ 0.2
COL27A1Q8IZC6 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COL27A1Q8IZC6 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.31■□□□□ 0.2
COL27A1Q8IZC6 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
COL27A1Q8IZC6 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
COL27A1Q8IZC6 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL27A1Q8IZC6 LYSMD4-203ENST00000378904 2122 ntBASIC16.31■□□□□ 0.2
COL27A1Q8IZC6 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL27A1Q8IZC6 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
COL27A1Q8IZC6 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
COL27A1Q8IZC6 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
COL27A1Q8IZC6 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL27A1Q8IZC6 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL27A1Q8IZC6 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC16.31■□□□□ 0.2
COL27A1Q8IZC6 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL27A1Q8IZC6 AL138781.2-201ENST00000617896 1843 ntBASIC16.31■□□□□ 0.2
COL27A1Q8IZC6 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
COL27A1Q8IZC6 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COL27A1Q8IZC6 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL27A1Q8IZC6 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL27A1Q8IZC6 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL27A1Q8IZC6 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COL27A1Q8IZC6 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL27A1Q8IZC6 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL27A1Q8IZC6 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL27A1Q8IZC6 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.31■□□□□ 0.2
COL27A1Q8IZC6 PMS2P4-201ENST00000412466 1052 ntBASIC16.31■□□□□ 0.2
COL27A1Q8IZC6 GSAP-205ENST00000430584 600 ntTSL 5 BASIC16.31■□□□□ 0.2
COL27A1Q8IZC6 AC092580.3-201ENST00000430932 139 ntBASIC16.31■□□□□ 0.2
COL27A1Q8IZC6 SPDYE14P-201ENST00000442619 822 ntBASIC16.31■□□□□ 0.2
COL27A1Q8IZC6 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
COL27A1Q8IZC6 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
COL27A1Q8IZC6 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
COL27A1Q8IZC6 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COL27A1Q8IZC6 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL27A1Q8IZC6 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL27A1Q8IZC6 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL27A1Q8IZC6 AC002056.1-201ENST00000395613 760 ntBASIC16.3■□□□□ 0.2
COL27A1Q8IZC6 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
COL27A1Q8IZC6 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL27A1Q8IZC6 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.3■□□□□ 0.2
COL27A1Q8IZC6 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.3■□□□□ 0.2
COL27A1Q8IZC6 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC16.3■□□□□ 0.2
COL27A1Q8IZC6 AC025678.2-201ENST00000562061 970 ntBASIC16.3■□□□□ 0.2
COL27A1Q8IZC6 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.3■□□□□ 0.2
COL27A1Q8IZC6 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL27A1Q8IZC6 AC239800.4-201ENST00000603712 296 ntBASIC16.3■□□□□ 0.2
COL27A1Q8IZC6 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.3■□□□□ 0.2
COL27A1Q8IZC6 AL139327.4-201ENST00000612362 153 ntBASIC16.3■□□□□ 0.2
COL27A1Q8IZC6 HFE2-206ENST00000634927 506 ntTSL 4 BASIC16.3■□□□□ 0.2
COL27A1Q8IZC6 AL645728.2-201ENST00000641974 660 ntBASIC16.3■□□□□ 0.2
COL27A1Q8IZC6 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL27A1Q8IZC6 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL27A1Q8IZC6 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL27A1Q8IZC6 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL27A1Q8IZC6 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
COL27A1Q8IZC6 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COL27A1Q8IZC6 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
COL27A1Q8IZC6 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
COL27A1Q8IZC6 BX323043.1-201ENST00000641006 1765 ntBASIC16.29■□□□□ 0.2
COL27A1Q8IZC6 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL27A1Q8IZC6 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
COL27A1Q8IZC6 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COL27A1Q8IZC6 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL27A1Q8IZC6 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL27A1Q8IZC6 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COL27A1Q8IZC6 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.29■□□□□ 0.2
COL27A1Q8IZC6 AC236430.1-201ENST00000402231 743 ntBASIC16.29■□□□□ 0.2
COL27A1Q8IZC6 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.29■□□□□ 0.2
COL27A1Q8IZC6 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.29■□□□□ 0.2
COL27A1Q8IZC6 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.29■□□□□ 0.2
COL27A1Q8IZC6 RN7SL589P-201ENST00000481268 310 ntBASIC16.29■□□□□ 0.2
COL27A1Q8IZC6 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COL27A1Q8IZC6 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.29■□□□□ 0.2
COL27A1Q8IZC6 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COL27A1Q8IZC6 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.29■□□□□ 0.2
COL27A1Q8IZC6 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.29■□□□□ 0.2
COL27A1Q8IZC6 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.29■□□□□ 0.2
COL27A1Q8IZC6 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL27A1Q8IZC6 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
COL27A1Q8IZC6 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL27A1Q8IZC6 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
COL27A1Q8IZC6 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL27A1Q8IZC6 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
COL27A1Q8IZC6 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.29■□□□□ 0.2
COL27A1Q8IZC6 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL27A1Q8IZC6 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.29■□□□□ 0.2
COL27A1Q8IZC6 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
COL27A1Q8IZC6 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms