Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
SLX4Q8IY92 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC21.11■□□□□ 0.97
SLX4Q8IY92 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLX4Q8IY92 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLX4Q8IY92 PPP6R2P1-201ENST00000450880 1275 ntBASIC21.11■□□□□ 0.97
SLX4Q8IY92 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC21.11■□□□□ 0.97
SLX4Q8IY92 AC069120.2-201ENST00000524091 540 ntBASIC21.11■□□□□ 0.97
SLX4Q8IY92 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC21.11■□□□□ 0.97
SLX4Q8IY92 TDG-209ENST00000544861 1387 ntTSL 2 BASIC21.11■□□□□ 0.97
SLX4Q8IY92 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC21.11■□□□□ 0.97
SLX4Q8IY92 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC21.11■□□□□ 0.97
SLX4Q8IY92 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLX4Q8IY92 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
SLX4Q8IY92 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
SLX4Q8IY92 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLX4Q8IY92 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC21.11■□□□□ 0.97
SLX4Q8IY92 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SLX4Q8IY92 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLX4Q8IY92 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLX4Q8IY92 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLX4Q8IY92 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC21.11■□□□□ 0.97
SLX4Q8IY92 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SLX4Q8IY92 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC21.11■□□□□ 0.97
SLX4Q8IY92 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC21.11■□□□□ 0.97
SLX4Q8IY92 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC21.11■□□□□ 0.97
SLX4Q8IY92 COX11-202ENST00000571584 1108 ntTSL 2 BASIC21.11■□□□□ 0.97
SLX4Q8IY92 AL158211.3-201ENST00000607385 239 ntBASIC21.11■□□□□ 0.97
SLX4Q8IY92 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SLX4Q8IY92 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SLX4Q8IY92 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC21.1■□□□□ 0.97
SLX4Q8IY92 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SLX4Q8IY92 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SLX4Q8IY92 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
SLX4Q8IY92 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
SLX4Q8IY92 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
SLX4Q8IY92 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC21.1■□□□□ 0.97
SLX4Q8IY92 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC21.1■□□□□ 0.97
SLX4Q8IY92 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC21.1■□□□□ 0.97
SLX4Q8IY92 AC084121.4-201ENST00000641598 221 ntBASIC21.1■□□□□ 0.97
SLX4Q8IY92 AF228730.8-201ENST00000642140 221 ntBASIC21.1■□□□□ 0.97
SLX4Q8IY92 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SLX4Q8IY92 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SLX4Q8IY92 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SLX4Q8IY92 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SLX4Q8IY92 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC21.09■□□□□ 0.97
SLX4Q8IY92 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SLX4Q8IY92 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC21.09■□□□□ 0.97
SLX4Q8IY92 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC21.09■□□□□ 0.97
SLX4Q8IY92 AC097493.3-201ENST00000509725 367 ntBASIC21.09■□□□□ 0.97
SLX4Q8IY92 MIR6080-201ENST00000617359 66 ntBASIC21.09■□□□□ 0.97
SLX4Q8IY92 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SLX4Q8IY92 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SLX4Q8IY92 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC21.09■□□□□ 0.97
SLX4Q8IY92 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SLX4Q8IY92 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SLX4Q8IY92 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC21.09■□□□□ 0.97
SLX4Q8IY92 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SLX4Q8IY92 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC21.09■□□□□ 0.97
SLX4Q8IY92 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
SLX4Q8IY92 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SLX4Q8IY92 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SLX4Q8IY92 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SLX4Q8IY92 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SLX4Q8IY92 HNRNPRP1-201ENST00000453465 1695 ntBASIC21.09■□□□□ 0.97
SLX4Q8IY92 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SLX4Q8IY92 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SLX4Q8IY92 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
SLX4Q8IY92 HMGA1P7-201ENST00000406908 502 ntBASIC21.08■□□□□ 0.97
SLX4Q8IY92 GOLGA6L11P-201ENST00000417252 1298 ntBASIC21.08■□□□□ 0.97
SLX4Q8IY92 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC21.08■□□□□ 0.97
SLX4Q8IY92 SPCS2P4-201ENST00000436160 681 ntBASIC21.08■□□□□ 0.97
SLX4Q8IY92 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SLX4Q8IY92 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SLX4Q8IY92 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
SLX4Q8IY92 LINC01225-203ENST00000563550 1244 ntBASIC21.08■□□□□ 0.97
SLX4Q8IY92 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC21.08■□□□□ 0.97
SLX4Q8IY92 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SLX4Q8IY92 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC21.08■□□□□ 0.97
SLX4Q8IY92 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SLX4Q8IY92 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SLX4Q8IY92 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SLX4Q8IY92 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC21.08■□□□□ 0.97
SLX4Q8IY92 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
SLX4Q8IY92 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SLX4Q8IY92 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SLX4Q8IY92 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC21.08■□□□□ 0.96
SLX4Q8IY92 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC21.08■□□□□ 0.96
SLX4Q8IY92 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SLX4Q8IY92 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SLX4Q8IY92 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC21.08■□□□□ 0.96
SLX4Q8IY92 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC21.08■□□□□ 0.96
SLX4Q8IY92 REXO1L9P-201ENST00000604264 2108 ntBASIC21.08■□□□□ 0.96
SLX4Q8IY92 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SLX4Q8IY92 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC21.08■□□□□ 0.96
SLX4Q8IY92 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SLX4Q8IY92 UXT-AS1-201ENST00000590504 1525 ntBASIC21.07■□□□□ 0.96
SLX4Q8IY92 WIZP1-201ENST00000531444 2299 ntBASIC21.07■□□□□ 0.96
SLX4Q8IY92 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC21.07■□□□□ 0.96
SLX4Q8IY92 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
SLX4Q8IY92 GK-202ENST00000378941 458 ntTSL 3 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms