Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.5■□□□□ 0.39
LDB1Q86U70 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.5■□□□□ 0.39
LDB1Q86U70 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LDB1Q86U70 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LDB1Q86U70 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LDB1Q86U70 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LDB1Q86U70 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LDB1Q86U70 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.5■□□□□ 0.39
LDB1Q86U70 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.5■□□□□ 0.39
LDB1Q86U70 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
LDB1Q86U70 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.5■□□□□ 0.39
LDB1Q86U70 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LDB1Q86U70 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.5■□□□□ 0.39
LDB1Q86U70 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
LDB1Q86U70 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LDB1Q86U70 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
LDB1Q86U70 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LDB1Q86U70 AC246785.2-201ENST00000432512 513 ntBASIC17.5■□□□□ 0.39
LDB1Q86U70 DRAXINP1-201ENST00000437611 948 ntBASIC17.5■□□□□ 0.39
LDB1Q86U70 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.5■□□□□ 0.39
LDB1Q86U70 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC17.5■□□□□ 0.39
LDB1Q86U70 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LDB1Q86U70 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.5■□□□□ 0.39
LDB1Q86U70 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
LDB1Q86U70 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
LDB1Q86U70 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.5■□□□□ 0.39
LDB1Q86U70 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
LDB1Q86U70 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.5■□□□□ 0.39
LDB1Q86U70 AC069148.1-201ENST00000608741 768 ntBASIC17.5■□□□□ 0.39
LDB1Q86U70 AC092119.3-201ENST00000612618 583 ntBASIC17.5■□□□□ 0.39
LDB1Q86U70 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.5■□□□□ 0.39
LDB1Q86U70 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
LDB1Q86U70 AC093458.2-201ENST00000623150 629 ntBASIC17.5■□□□□ 0.39
LDB1Q86U70 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LDB1Q86U70 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LDB1Q86U70 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LDB1Q86U70 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
LDB1Q86U70 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.5■□□□□ 0.39
LDB1Q86U70 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LDB1Q86U70 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
LDB1Q86U70 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LDB1Q86U70 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.5■□□□□ 0.39
LDB1Q86U70 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC17.5■□□□□ 0.39
LDB1Q86U70 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LDB1Q86U70 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
LDB1Q86U70 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LDB1Q86U70 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LDB1Q86U70 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LDB1Q86U70 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LDB1Q86U70 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
LDB1Q86U70 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LDB1Q86U70 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LDB1Q86U70 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
LDB1Q86U70 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LDB1Q86U70 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LDB1Q86U70 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
LDB1Q86U70 VENTXP7-201ENST00000475503 772 ntBASIC17.49■□□□□ 0.39
LDB1Q86U70 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.49■□□□□ 0.39
LDB1Q86U70 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.49■□□□□ 0.39
LDB1Q86U70 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.49■□□□□ 0.39
LDB1Q86U70 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.49■□□□□ 0.39
LDB1Q86U70 NPAP1P7-201ENST00000613027 823 ntBASIC17.49■□□□□ 0.39
LDB1Q86U70 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.49■□□□□ 0.39
LDB1Q86U70 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
LDB1Q86U70 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LDB1Q86U70 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LDB1Q86U70 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LDB1Q86U70 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC17.49■□□□□ 0.39
LDB1Q86U70 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LDB1Q86U70 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC17.49■□□□□ 0.39
LDB1Q86U70 AC022211.2-201ENST00000585075 2527 ntBASIC17.49■□□□□ 0.39
LDB1Q86U70 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.49■□□□□ 0.39
LDB1Q86U70 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LDB1Q86U70 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
LDB1Q86U70 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
LDB1Q86U70 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LDB1Q86U70 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LDB1Q86U70 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LDB1Q86U70 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
LDB1Q86U70 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LDB1Q86U70 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
LDB1Q86U70 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.48■□□□□ 0.39
LDB1Q86U70 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LDB1Q86U70 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
LDB1Q86U70 KRT17P6-201ENST00000453795 1220 ntBASIC17.48■□□□□ 0.39
LDB1Q86U70 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.48■□□□□ 0.39
LDB1Q86U70 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC17.48■□□□□ 0.39
LDB1Q86U70 AP000867.3-201ENST00000524675 377 ntBASIC17.48■□□□□ 0.39
LDB1Q86U70 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.48■□□□□ 0.39
LDB1Q86U70 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.48■□□□□ 0.39
LDB1Q86U70 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
LDB1Q86U70 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.48■□□□□ 0.39
LDB1Q86U70 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LDB1Q86U70 AL139327.4-201ENST00000612362 153 ntBASIC17.48■□□□□ 0.39
LDB1Q86U70 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LDB1Q86U70 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LDB1Q86U70 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.48■□□□□ 0.39
LDB1Q86U70 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.48■□□□□ 0.39
LDB1Q86U70 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.48■□□□□ 0.39
LDB1Q86U70 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms