Protein–RNA interactions for Protein: Q7LBR1

CHMP1B, Charged multivesicular body protein 1b, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1BQ7LBR1 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CHMP1BQ7LBR1 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.21■□□□□ 0.19
CHMP1BQ7LBR1 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CHMP1BQ7LBR1 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.21■□□□□ 0.19
CHMP1BQ7LBR1 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC16.21■□□□□ 0.19
CHMP1BQ7LBR1 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHMP1BQ7LBR1 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CHMP1BQ7LBR1 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
CHMP1BQ7LBR1 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.21■□□□□ 0.18
CHMP1BQ7LBR1 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
CHMP1BQ7LBR1 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
CHMP1BQ7LBR1 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
CHMP1BQ7LBR1 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CHMP1BQ7LBR1 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CHMP1BQ7LBR1 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.2■□□□□ 0.18
CHMP1BQ7LBR1 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP1BQ7LBR1 LINC00167-201ENST00000530583 1419 ntBASIC16.2■□□□□ 0.18
CHMP1BQ7LBR1 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP1BQ7LBR1 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.2■□□□□ 0.18
CHMP1BQ7LBR1 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP1BQ7LBR1 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP1BQ7LBR1 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP1BQ7LBR1 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP1BQ7LBR1 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.2■□□□□ 0.18
CHMP1BQ7LBR1 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP1BQ7LBR1 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP1BQ7LBR1 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP1BQ7LBR1 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP1BQ7LBR1 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.2■□□□□ 0.18
CHMP1BQ7LBR1 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
CHMP1BQ7LBR1 AC246785.2-201ENST00000432512 513 ntBASIC16.2■□□□□ 0.18
CHMP1BQ7LBR1 NUS1P1-201ENST00000446295 882 ntBASIC16.2■□□□□ 0.18
CHMP1BQ7LBR1 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
CHMP1BQ7LBR1 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.2■□□□□ 0.18
CHMP1BQ7LBR1 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.2■□□□□ 0.18
CHMP1BQ7LBR1 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.2■□□□□ 0.18
CHMP1BQ7LBR1 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.2■□□□□ 0.18
CHMP1BQ7LBR1 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.2■□□□□ 0.18
CHMP1BQ7LBR1 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP1BQ7LBR1 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
CHMP1BQ7LBR1 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
CHMP1BQ7LBR1 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.2■□□□□ 0.18
CHMP1BQ7LBR1 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP1BQ7LBR1 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP1BQ7LBR1 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP1BQ7LBR1 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP1BQ7LBR1 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
CHMP1BQ7LBR1 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHMP1BQ7LBR1 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
CHMP1BQ7LBR1 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHMP1BQ7LBR1 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHMP1BQ7LBR1 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
CHMP1BQ7LBR1 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHMP1BQ7LBR1 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.19■□□□□ 0.18
CHMP1BQ7LBR1 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHMP1BQ7LBR1 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHMP1BQ7LBR1 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHMP1BQ7LBR1 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.19■□□□□ 0.18
CHMP1BQ7LBR1 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHMP1BQ7LBR1 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.19■□□□□ 0.18
CHMP1BQ7LBR1 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHMP1BQ7LBR1 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHMP1BQ7LBR1 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
CHMP1BQ7LBR1 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHMP1BQ7LBR1 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHMP1BQ7LBR1 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHMP1BQ7LBR1 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC16.19■□□□□ 0.18
CHMP1BQ7LBR1 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHMP1BQ7LBR1 AL450487.1-201ENST00000426799 995 ntBASIC16.19■□□□□ 0.18
CHMP1BQ7LBR1 KRT18P65-201ENST00000439811 1286 ntBASIC16.19■□□□□ 0.18
CHMP1BQ7LBR1 KRT17P6-201ENST00000453795 1220 ntBASIC16.19■□□□□ 0.18
CHMP1BQ7LBR1 RN7SL606P-201ENST00000472779 293 ntBASIC16.19■□□□□ 0.18
CHMP1BQ7LBR1 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.19■□□□□ 0.18
CHMP1BQ7LBR1 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHMP1BQ7LBR1 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHMP1BQ7LBR1 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHMP1BQ7LBR1 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC16.19■□□□□ 0.18
CHMP1BQ7LBR1 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CHMP1BQ7LBR1 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHMP1BQ7LBR1 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHMP1BQ7LBR1 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.19■□□□□ 0.18
CHMP1BQ7LBR1 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHMP1BQ7LBR1 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHMP1BQ7LBR1 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHMP1BQ7LBR1 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHMP1BQ7LBR1 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.19■□□□□ 0.18
CHMP1BQ7LBR1 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.19■□□□□ 0.18
CHMP1BQ7LBR1 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHMP1BQ7LBR1 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.19■□□□□ 0.18
CHMP1BQ7LBR1 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHMP1BQ7LBR1 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHMP1BQ7LBR1 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
CHMP1BQ7LBR1 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHMP1BQ7LBR1 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
CHMP1BQ7LBR1 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
CHMP1BQ7LBR1 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.19■□□□□ 0.18
CHMP1BQ7LBR1 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHMP1BQ7LBR1 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
CHMP1BQ7LBR1 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.18■□□□□ 0.18
CHMP1BQ7LBR1 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms