Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 LINC00304-203ENST00000565008 1864 ntBASIC22.05■■□□□ 1.12
COPS6Q7L5N1 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
COPS6Q7L5N1 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC22.04■■□□□ 1.12
COPS6Q7L5N1 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
COPS6Q7L5N1 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
COPS6Q7L5N1 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
COPS6Q7L5N1 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC22.04■■□□□ 1.12
COPS6Q7L5N1 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
COPS6Q7L5N1 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
COPS6Q7L5N1 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
COPS6Q7L5N1 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
COPS6Q7L5N1 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC22.04■■□□□ 1.12
COPS6Q7L5N1 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC22.04■■□□□ 1.12
COPS6Q7L5N1 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC22.04■■□□□ 1.12
COPS6Q7L5N1 TK1-204ENST00000590430 683 ntTSL 3 BASIC22.04■■□□□ 1.12
COPS6Q7L5N1 AL691403.2-201ENST00000618460 490 ntBASIC22.04■■□□□ 1.12
COPS6Q7L5N1 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC22.04■■□□□ 1.12
COPS6Q7L5N1 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC22.04■■□□□ 1.12
COPS6Q7L5N1 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
COPS6Q7L5N1 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
COPS6Q7L5N1 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
COPS6Q7L5N1 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
COPS6Q7L5N1 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
COPS6Q7L5N1 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
COPS6Q7L5N1 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
COPS6Q7L5N1 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
COPS6Q7L5N1 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC22.03■■□□□ 1.12
COPS6Q7L5N1 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
COPS6Q7L5N1 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
COPS6Q7L5N1 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
COPS6Q7L5N1 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
COPS6Q7L5N1 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
COPS6Q7L5N1 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC22.03■■□□□ 1.12
COPS6Q7L5N1 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
COPS6Q7L5N1 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC22.03■■□□□ 1.12
COPS6Q7L5N1 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
COPS6Q7L5N1 MRPL20P1-201ENST00000400819 433 ntBASIC22.03■■□□□ 1.12
COPS6Q7L5N1 HNRNPA1P28-201ENST00000424481 961 ntBASIC22.03■■□□□ 1.12
COPS6Q7L5N1 DNAJB3-201ENST00000446806 729 ntBASIC22.03■■□□□ 1.12
COPS6Q7L5N1 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
COPS6Q7L5N1 DHDH-204ENST00000523250 634 ntTSL 5 BASIC22.03■■□□□ 1.12
COPS6Q7L5N1 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC22.03■■□□□ 1.12
COPS6Q7L5N1 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC22.03■■□□□ 1.12
COPS6Q7L5N1 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC22.03■■□□□ 1.12
COPS6Q7L5N1 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
COPS6Q7L5N1 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
COPS6Q7L5N1 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC22.03■■□□□ 1.12
COPS6Q7L5N1 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
COPS6Q7L5N1 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
COPS6Q7L5N1 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
COPS6Q7L5N1 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC22.03■■□□□ 1.12
COPS6Q7L5N1 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
COPS6Q7L5N1 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
COPS6Q7L5N1 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
COPS6Q7L5N1 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
COPS6Q7L5N1 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
COPS6Q7L5N1 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
COPS6Q7L5N1 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
COPS6Q7L5N1 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC22.02■■□□□ 1.12
COPS6Q7L5N1 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC22.02■■□□□ 1.12
COPS6Q7L5N1 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC22.02■■□□□ 1.12
COPS6Q7L5N1 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC22.02■■□□□ 1.12
COPS6Q7L5N1 POLD4-207ENST00000531239 584 ntTSL 2 BASIC22.02■■□□□ 1.12
COPS6Q7L5N1 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC22.02■■□□□ 1.12
COPS6Q7L5N1 MTDHP5-201ENST00000598980 586 ntBASIC22.02■■□□□ 1.12
COPS6Q7L5N1 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC22.02■■□□□ 1.12
COPS6Q7L5N1 AL513190.1-201ENST00000621254 727 ntBASIC22.02■■□□□ 1.12
COPS6Q7L5N1 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
COPS6Q7L5N1 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
COPS6Q7L5N1 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC22.02■■□□□ 1.12
COPS6Q7L5N1 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC22.02■■□□□ 1.11
COPS6Q7L5N1 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
COPS6Q7L5N1 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC22.01■■□□□ 1.11
COPS6Q7L5N1 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COPS6Q7L5N1 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COPS6Q7L5N1 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COPS6Q7L5N1 NEFHP1-201ENST00000412845 2629 ntBASIC22.01■■□□□ 1.11
COPS6Q7L5N1 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
COPS6Q7L5N1 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
COPS6Q7L5N1 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC22.01■■□□□ 1.11
COPS6Q7L5N1 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
COPS6Q7L5N1 PI4KAP1-204ENST00000612579 1703 ntBASIC22.01■■□□□ 1.11
COPS6Q7L5N1 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COPS6Q7L5N1 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COPS6Q7L5N1 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC22.01■■□□□ 1.11
COPS6Q7L5N1 AC092183.1-201ENST00000469884 875 ntBASIC22.01■■□□□ 1.11
COPS6Q7L5N1 MAL2-202ENST00000531508 892 ntTSL 3 BASIC22.01■■□□□ 1.11
COPS6Q7L5N1 MIR3687-2-201ENST00000577708 61 ntBASIC22.01■■□□□ 1.11
COPS6Q7L5N1 MIR3687-1-201ENST00000614492 61 ntBASIC22.01■■□□□ 1.11
COPS6Q7L5N1 AC010654.1-201ENST00000615722 808 ntBASIC22.01■■□□□ 1.11
COPS6Q7L5N1 GGTLC5P-201ENST00000617623 998 ntBASIC22.01■■□□□ 1.11
COPS6Q7L5N1 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
COPS6Q7L5N1 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC22.01■■□□□ 1.11
COPS6Q7L5N1 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
COPS6Q7L5N1 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC22■■□□□ 1.11
COPS6Q7L5N1 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
COPS6Q7L5N1 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC22■■□□□ 1.11
COPS6Q7L5N1 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
COPS6Q7L5N1 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
COPS6Q7L5N1 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC22■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms