Protein–RNA interactions for Protein: Q6P1M0

SLC27A4, Long-chain fatty acid transport protein 4, humanhuman

Predictions only

Length 643 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC27A4Q6P1M0 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC27A4Q6P1M0 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC27A4Q6P1M0 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
SLC27A4Q6P1M0 AGGF1P2-201ENST00000426656 2106 ntBASIC15.97■□□□□ 0.15
SLC27A4Q6P1M0 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC27A4Q6P1M0 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC27A4Q6P1M0 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC27A4Q6P1M0 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC27A4Q6P1M0 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC27A4Q6P1M0 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC27A4Q6P1M0 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC15.97■□□□□ 0.15
SLC27A4Q6P1M0 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC15.97■□□□□ 0.15
SLC27A4Q6P1M0 ECEL1P2-202ENST00000465689 757 ntBASIC15.97■□□□□ 0.15
SLC27A4Q6P1M0 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
SLC27A4Q6P1M0 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC15.97■□□□□ 0.15
SLC27A4Q6P1M0 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.97■□□□□ 0.15
SLC27A4Q6P1M0 AC012306.2-201ENST00000609350 630 ntBASIC15.97■□□□□ 0.15
SLC27A4Q6P1M0 AC009154.2-201ENST00000621177 724 ntBASIC15.97■□□□□ 0.15
SLC27A4Q6P1M0 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC15.97■□□□□ 0.15
SLC27A4Q6P1M0 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC27A4Q6P1M0 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC27A4Q6P1M0 AC116353.5-201ENST00000638148 1699 ntBASIC15.97■□□□□ 0.15
SLC27A4Q6P1M0 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
SLC27A4Q6P1M0 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC27A4Q6P1M0 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC27A4Q6P1M0 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SLC27A4Q6P1M0 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SLC27A4Q6P1M0 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
SLC27A4Q6P1M0 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC15.97■□□□□ 0.15
SLC27A4Q6P1M0 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.97■□□□□ 0.15
SLC27A4Q6P1M0 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC27A4Q6P1M0 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
SLC27A4Q6P1M0 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
SLC27A4Q6P1M0 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
SLC27A4Q6P1M0 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC27A4Q6P1M0 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC27A4Q6P1M0 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SLC27A4Q6P1M0 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SLC27A4Q6P1M0 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC27A4Q6P1M0 RHBDF1P1-201ENST00000427504 1941 ntBASIC15.96■□□□□ 0.15
SLC27A4Q6P1M0 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.96■□□□□ 0.15
SLC27A4Q6P1M0 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
SLC27A4Q6P1M0 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC27A4Q6P1M0 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC27A4Q6P1M0 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.96■□□□□ 0.15
SLC27A4Q6P1M0 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SLC27A4Q6P1M0 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SLC27A4Q6P1M0 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.96■□□□□ 0.15
SLC27A4Q6P1M0 ATP5G1P1-201ENST00000448724 379 ntBASIC15.96■□□□□ 0.15
SLC27A4Q6P1M0 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SLC27A4Q6P1M0 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC15.96■□□□□ 0.15
SLC27A4Q6P1M0 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC27A4Q6P1M0 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC15.96■□□□□ 0.15
SLC27A4Q6P1M0 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC15.96■□□□□ 0.15
SLC27A4Q6P1M0 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.96■□□□□ 0.15
SLC27A4Q6P1M0 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
SLC27A4Q6P1M0 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC15.96■□□□□ 0.15
SLC27A4Q6P1M0 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC27A4Q6P1M0 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
SLC27A4Q6P1M0 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.96■□□□□ 0.15
SLC27A4Q6P1M0 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.96■□□□□ 0.15
SLC27A4Q6P1M0 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC27A4Q6P1M0 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
SLC27A4Q6P1M0 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SLC27A4Q6P1M0 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC27A4Q6P1M0 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SLC27A4Q6P1M0 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC27A4Q6P1M0 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC27A4Q6P1M0 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC27A4Q6P1M0 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC27A4Q6P1M0 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC27A4Q6P1M0 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
SLC27A4Q6P1M0 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC27A4Q6P1M0 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SLC27A4Q6P1M0 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
SLC27A4Q6P1M0 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
SLC27A4Q6P1M0 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC15.96■□□□□ 0.14
SLC27A4Q6P1M0 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC27A4Q6P1M0 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.95■□□□□ 0.14
SLC27A4Q6P1M0 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
SLC27A4Q6P1M0 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
SLC27A4Q6P1M0 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
SLC27A4Q6P1M0 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.95■□□□□ 0.14
SLC27A4Q6P1M0 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC27A4Q6P1M0 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
SLC27A4Q6P1M0 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SLC27A4Q6P1M0 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC27A4Q6P1M0 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
SLC27A4Q6P1M0 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC15.95■□□□□ 0.14
SLC27A4Q6P1M0 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC15.95■□□□□ 0.14
SLC27A4Q6P1M0 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC15.95■□□□□ 0.14
SLC27A4Q6P1M0 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.95■□□□□ 0.14
SLC27A4Q6P1M0 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
SLC27A4Q6P1M0 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SLC27A4Q6P1M0 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC15.95■□□□□ 0.14
SLC27A4Q6P1M0 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SLC27A4Q6P1M0 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC27A4Q6P1M0 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC15.95■□□□□ 0.14
SLC27A4Q6P1M0 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC27A4Q6P1M0 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms