Protein–RNA interactions for Protein: Q5VT99

LRRC38, Leucine-rich repeat-containing protein 38, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC38Q5VT99 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC38Q5VT99 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC38Q5VT99 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC38Q5VT99 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC38Q5VT99 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
LRRC38Q5VT99 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC38Q5VT99 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.18■□□□□ 0.5
LRRC38Q5VT99 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC38Q5VT99 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
LRRC38Q5VT99 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.18■□□□□ 0.5
LRRC38Q5VT99 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.18■□□□□ 0.5
LRRC38Q5VT99 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
LRRC38Q5VT99 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC38Q5VT99 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC38Q5VT99 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC18.18■□□□□ 0.5
LRRC38Q5VT99 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
LRRC38Q5VT99 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.18■□□□□ 0.5
LRRC38Q5VT99 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC38Q5VT99 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC38Q5VT99 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.18■□□□□ 0.5
LRRC38Q5VT99 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC38Q5VT99 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC38Q5VT99 AL049597.2-201ENST00000565575 961 ntBASIC18.18■□□□□ 0.5
LRRC38Q5VT99 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
LRRC38Q5VT99 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.18■□□□□ 0.5
LRRC38Q5VT99 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.18■□□□□ 0.5
LRRC38Q5VT99 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
LRRC38Q5VT99 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC18.18■□□□□ 0.5
LRRC38Q5VT99 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC18.18■□□□□ 0.5
LRRC38Q5VT99 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
LRRC38Q5VT99 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC38Q5VT99 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC38Q5VT99 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC38Q5VT99 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.18■□□□□ 0.5
LRRC38Q5VT99 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.18■□□□□ 0.5
LRRC38Q5VT99 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC38Q5VT99 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC38Q5VT99 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
LRRC38Q5VT99 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC38Q5VT99 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
LRRC38Q5VT99 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.17■□□□□ 0.5
LRRC38Q5VT99 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC38Q5VT99 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC38Q5VT99 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC38Q5VT99 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC38Q5VT99 AC060834.1-201ENST00000443027 2032 ntBASIC18.17■□□□□ 0.5
LRRC38Q5VT99 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
LRRC38Q5VT99 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
LRRC38Q5VT99 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC38Q5VT99 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC38Q5VT99 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC38Q5VT99 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.17■□□□□ 0.5
LRRC38Q5VT99 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.17■□□□□ 0.5
LRRC38Q5VT99 AC091607.1-201ENST00000490318 1060 ntBASIC18.17■□□□□ 0.5
LRRC38Q5VT99 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.17■□□□□ 0.5
LRRC38Q5VT99 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC18.17■□□□□ 0.5
LRRC38Q5VT99 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
LRRC38Q5VT99 AP005901.3-202ENST00000581653 237 ntBASIC18.17■□□□□ 0.5
LRRC38Q5VT99 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC38Q5VT99 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.17■□□□□ 0.5
LRRC38Q5VT99 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
LRRC38Q5VT99 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
LRRC38Q5VT99 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC38Q5VT99 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.17■□□□□ 0.5
LRRC38Q5VT99 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC38Q5VT99 FUT8-AS1-201ENST00000621019 1521 ntBASIC18.17■□□□□ 0.5
LRRC38Q5VT99 NKILA-202ENST00000614771 2598 ntBASIC18.17■□□□□ 0.5
LRRC38Q5VT99 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
LRRC38Q5VT99 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC38Q5VT99 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC38Q5VT99 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC18.16■□□□□ 0.5
LRRC38Q5VT99 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC38Q5VT99 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
LRRC38Q5VT99 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.16■□□□□ 0.5
LRRC38Q5VT99 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
LRRC38Q5VT99 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC38Q5VT99 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC38Q5VT99 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC38Q5VT99 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
LRRC38Q5VT99 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC38Q5VT99 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC38Q5VT99 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC38Q5VT99 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC38Q5VT99 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.16■□□□□ 0.5
LRRC38Q5VT99 KRT18P21-201ENST00000515767 1272 ntBASIC18.16■□□□□ 0.5
LRRC38Q5VT99 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.16■□□□□ 0.5
LRRC38Q5VT99 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.16■□□□□ 0.5
LRRC38Q5VT99 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
LRRC38Q5VT99 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC38Q5VT99 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
LRRC38Q5VT99 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.16■□□□□ 0.5
LRRC38Q5VT99 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
LRRC38Q5VT99 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC38Q5VT99 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
LRRC38Q5VT99 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
LRRC38Q5VT99 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
LRRC38Q5VT99 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
LRRC38Q5VT99 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC38Q5VT99 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC38Q5VT99 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms