Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 RNA5SP423-201ENST00000517127 109 ntBASIC16.84■□□□□ 0.29
RIF1Q5UIP0 AC109462.3-201ENST00000573934 613 ntBASIC16.84■□□□□ 0.29
RIF1Q5UIP0 PRR29-204ENST00000577953 565 ntTSL 4 BASIC16.84■□□□□ 0.29
RIF1Q5UIP0 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
RIF1Q5UIP0 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
RIF1Q5UIP0 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.29
RIF1Q5UIP0 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RIF1Q5UIP0 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
RIF1Q5UIP0 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
RIF1Q5UIP0 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.83■□□□□ 0.29
RIF1Q5UIP0 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
RIF1Q5UIP0 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
RIF1Q5UIP0 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC16.83■□□□□ 0.28
RIF1Q5UIP0 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.83■□□□□ 0.28
RIF1Q5UIP0 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RIF1Q5UIP0 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC16.83■□□□□ 0.28
RIF1Q5UIP0 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.83■□□□□ 0.28
RIF1Q5UIP0 RN7SL752P-201ENST00000463779 287 ntBASIC16.83■□□□□ 0.28
RIF1Q5UIP0 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC16.83■□□□□ 0.28
RIF1Q5UIP0 CHCHD2P3-201ENST00000603038 451 ntBASIC16.83■□□□□ 0.28
RIF1Q5UIP0 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RIF1Q5UIP0 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
RIF1Q5UIP0 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
RIF1Q5UIP0 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RIF1Q5UIP0 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.83■□□□□ 0.28
RIF1Q5UIP0 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC16.83■□□□□ 0.28
RIF1Q5UIP0 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC16.83■□□□□ 0.28
RIF1Q5UIP0 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
RIF1Q5UIP0 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RIF1Q5UIP0 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RIF1Q5UIP0 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RIF1Q5UIP0 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.82■□□□□ 0.28
RIF1Q5UIP0 AC092506.1-202ENST00000401022 528 ntBASIC16.82■□□□□ 0.28
RIF1Q5UIP0 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RIF1Q5UIP0 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.82■□□□□ 0.28
RIF1Q5UIP0 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.82■□□□□ 0.28
RIF1Q5UIP0 AC008735.3-201ENST00000596646 500 ntBASIC16.82■□□□□ 0.28
RIF1Q5UIP0 AL109936.8-201ENST00000641772 604 ntBASIC16.82■□□□□ 0.28
RIF1Q5UIP0 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RIF1Q5UIP0 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RIF1Q5UIP0 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RIF1Q5UIP0 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RIF1Q5UIP0 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RIF1Q5UIP0 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.82■□□□□ 0.28
RIF1Q5UIP0 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RIF1Q5UIP0 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RIF1Q5UIP0 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RIF1Q5UIP0 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RIF1Q5UIP0 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC16.82■□□□□ 0.28
RIF1Q5UIP0 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.82■□□□□ 0.28
RIF1Q5UIP0 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RIF1Q5UIP0 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RIF1Q5UIP0 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RIF1Q5UIP0 AL645728.2-201ENST00000641974 660 ntBASIC16.82■□□□□ 0.28
RIF1Q5UIP0 AC020907.1-201ENST00000616460 1350 ntBASIC16.82■□□□□ 0.28
RIF1Q5UIP0 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RIF1Q5UIP0 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC16.82■□□□□ 0.28
RIF1Q5UIP0 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.82■□□□□ 0.28
RIF1Q5UIP0 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RIF1Q5UIP0 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.82■□□□□ 0.28
RIF1Q5UIP0 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RIF1Q5UIP0 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RIF1Q5UIP0 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RIF1Q5UIP0 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RIF1Q5UIP0 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.81■□□□□ 0.28
RIF1Q5UIP0 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC16.81■□□□□ 0.28
RIF1Q5UIP0 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC16.81■□□□□ 0.28
RIF1Q5UIP0 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RIF1Q5UIP0 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.81■□□□□ 0.28
RIF1Q5UIP0 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.81■□□□□ 0.28
RIF1Q5UIP0 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RIF1Q5UIP0 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RIF1Q5UIP0 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RIF1Q5UIP0 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.81■□□□□ 0.28
RIF1Q5UIP0 AC009336.1-201ENST00000608941 1553 ntBASIC16.81■□□□□ 0.28
RIF1Q5UIP0 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
RIF1Q5UIP0 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RIF1Q5UIP0 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RIF1Q5UIP0 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.81■□□□□ 0.28
RIF1Q5UIP0 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
RIF1Q5UIP0 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RIF1Q5UIP0 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
RIF1Q5UIP0 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RIF1Q5UIP0 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RIF1Q5UIP0 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.81■□□□□ 0.28
RIF1Q5UIP0 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC16.81■□□□□ 0.28
RIF1Q5UIP0 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RIF1Q5UIP0 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RIF1Q5UIP0 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC16.81■□□□□ 0.28
RIF1Q5UIP0 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RIF1Q5UIP0 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RIF1Q5UIP0 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
RIF1Q5UIP0 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RIF1Q5UIP0 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RIF1Q5UIP0 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.81■□□□□ 0.28
RIF1Q5UIP0 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RIF1Q5UIP0 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RIF1Q5UIP0 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.8■□□□□ 0.28
RIF1Q5UIP0 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.8■□□□□ 0.28
RIF1Q5UIP0 COG4-212ENST00000564653 590 ntTSL 5 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms