Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00242Q5T6M2 LINC02012-201ENST00000608206 1725 ntBASIC12□□□□□ -0.49
LINC00242Q5T6M2 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC12□□□□□ -0.49
LINC00242Q5T6M2 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00242Q5T6M2 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00242Q5T6M2 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00242Q5T6M2 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC12□□□□□ -0.49
LINC00242Q5T6M2 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00242Q5T6M2 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC12□□□□□ -0.49
LINC00242Q5T6M2 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
LINC00242Q5T6M2 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC12□□□□□ -0.49
LINC00242Q5T6M2 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
LINC00242Q5T6M2 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC12□□□□□ -0.49
LINC00242Q5T6M2 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00242Q5T6M2 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00242Q5T6M2 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC12□□□□□ -0.49
LINC00242Q5T6M2 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
LINC00242Q5T6M2 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC12□□□□□ -0.49
LINC00242Q5T6M2 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC12□□□□□ -0.49
LINC00242Q5T6M2 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00242Q5T6M2 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC12□□□□□ -0.49
LINC00242Q5T6M2 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC12□□□□□ -0.49
LINC00242Q5T6M2 FAM201B-201ENST00000458407 597 ntBASIC12□□□□□ -0.49
LINC00242Q5T6M2 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC12□□□□□ -0.49
LINC00242Q5T6M2 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC12□□□□□ -0.49
LINC00242Q5T6M2 NT5C-210ENST00000582160 860 ntTSL 2 BASIC12□□□□□ -0.49
LINC00242Q5T6M2 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC12□□□□□ -0.49
LINC00242Q5T6M2 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC12□□□□□ -0.49
LINC00242Q5T6M2 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC12□□□□□ -0.49
LINC00242Q5T6M2 AP000525.1-201ENST00000608286 694 ntBASIC12□□□□□ -0.49
LINC00242Q5T6M2 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC12□□□□□ -0.49
LINC00242Q5T6M2 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00242Q5T6M2 CES3-203ENST00000543856 3178 ntTSL 2 BASIC12□□□□□ -0.49
LINC00242Q5T6M2 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC12□□□□□ -0.49
LINC00242Q5T6M2 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC12□□□□□ -0.49
LINC00242Q5T6M2 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00242Q5T6M2 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC12□□□□□ -0.49
LINC00242Q5T6M2 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC12□□□□□ -0.49
LINC00242Q5T6M2 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC12□□□□□ -0.49
LINC00242Q5T6M2 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC12□□□□□ -0.49
LINC00242Q5T6M2 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00242Q5T6M2 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC12□□□□□ -0.49
LINC00242Q5T6M2 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00242Q5T6M2 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC12□□□□□ -0.49
LINC00242Q5T6M2 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00242Q5T6M2 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC12□□□□□ -0.49
LINC00242Q5T6M2 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
LINC00242Q5T6M2 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00242Q5T6M2 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00242Q5T6M2 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00242Q5T6M2 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00242Q5T6M2 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00242Q5T6M2 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00242Q5T6M2 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00242Q5T6M2 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC12□□□□□ -0.49
LINC00242Q5T6M2 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LINC00242Q5T6M2 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
LINC00242Q5T6M2 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC11.99□□□□□ -0.49
LINC00242Q5T6M2 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00242Q5T6M2 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00242Q5T6M2 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00242Q5T6M2 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00242Q5T6M2 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00242Q5T6M2 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00242Q5T6M2 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00242Q5T6M2 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC11.99□□□□□ -0.49
LINC00242Q5T6M2 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC11.99□□□□□ -0.49
LINC00242Q5T6M2 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00242Q5T6M2 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00242Q5T6M2 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC11.99□□□□□ -0.49
LINC00242Q5T6M2 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00242Q5T6M2 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00242Q5T6M2 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00242Q5T6M2 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00242Q5T6M2 HES2-202ENST00000377836 507 ntTSL 2 BASIC11.99□□□□□ -0.49
LINC00242Q5T6M2 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC11.99□□□□□ -0.49
LINC00242Q5T6M2 AL390955.1-201ENST00000428694 934 ntBASIC11.99□□□□□ -0.49
LINC00242Q5T6M2 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC11.99□□□□□ -0.49
LINC00242Q5T6M2 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC11.99□□□□□ -0.49
LINC00242Q5T6M2 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00242Q5T6M2 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
LINC00242Q5T6M2 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC11.99□□□□□ -0.49
LINC00242Q5T6M2 AL139327.4-201ENST00000612362 153 ntBASIC11.99□□□□□ -0.49
LINC00242Q5T6M2 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00242Q5T6M2 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC11.99□□□□□ -0.49
LINC00242Q5T6M2 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
LINC00242Q5T6M2 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC11.99□□□□□ -0.49
LINC00242Q5T6M2 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC11.99□□□□□ -0.49
LINC00242Q5T6M2 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC11.99□□□□□ -0.49
LINC00242Q5T6M2 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
LINC00242Q5T6M2 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
LINC00242Q5T6M2 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC11.99□□□□□ -0.49
LINC00242Q5T6M2 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00242Q5T6M2 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00242Q5T6M2 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00242Q5T6M2 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00242Q5T6M2 AC008894.3-201ENST00000624324 3103 ntBASIC11.99□□□□□ -0.49
LINC00242Q5T6M2 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00242Q5T6M2 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
LINC00242Q5T6M2 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms