Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
SNAPC4Q5SXM2 AC022144.1-201ENST00000602255 1580 ntBASIC28.3■■■□□ 2.12
SNAPC4Q5SXM2 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
SNAPC4Q5SXM2 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC28.3■■■□□ 2.12
SNAPC4Q5SXM2 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC28.3■■■□□ 2.12
SNAPC4Q5SXM2 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC28.3■■■□□ 2.12
SNAPC4Q5SXM2 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC28.29■■■□□ 2.12
SNAPC4Q5SXM2 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
SNAPC4Q5SXM2 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
SNAPC4Q5SXM2 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
SNAPC4Q5SXM2 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC28.29■■■□□ 2.12
SNAPC4Q5SXM2 ENSA-206ENST00000361631 725 ntTSL 2 BASIC28.29■■■□□ 2.12
SNAPC4Q5SXM2 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
SNAPC4Q5SXM2 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC28.29■■■□□ 2.12
SNAPC4Q5SXM2 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC28.29■■■□□ 2.12
SNAPC4Q5SXM2 AC073592.8-201ENST00000624126 511 ntBASIC28.29■■■□□ 2.12
SNAPC4Q5SXM2 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
SNAPC4Q5SXM2 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
SNAPC4Q5SXM2 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC28.29■■■□□ 2.12
SNAPC4Q5SXM2 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC28.29■■■□□ 2.12
SNAPC4Q5SXM2 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC28.29■■■□□ 2.12
SNAPC4Q5SXM2 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC28.29■■■□□ 2.12
SNAPC4Q5SXM2 AL096828.2-201ENST00000567259 1965 ntBASIC28.29■■■□□ 2.12
SNAPC4Q5SXM2 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
SNAPC4Q5SXM2 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
SNAPC4Q5SXM2 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
SNAPC4Q5SXM2 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC28.28■■■□□ 2.12
SNAPC4Q5SXM2 HMGA1P7-201ENST00000406908 502 ntBASIC28.28■■■□□ 2.12
SNAPC4Q5SXM2 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC28.28■■■□□ 2.12
SNAPC4Q5SXM2 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC28.28■■■□□ 2.12
SNAPC4Q5SXM2 MIR4515-201ENST00000584082 81 ntBASIC28.28■■■□□ 2.12
SNAPC4Q5SXM2 AC116407.2-201ENST00000613639 860 ntBASIC28.28■■■□□ 2.12
SNAPC4Q5SXM2 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
SNAPC4Q5SXM2 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC28.28■■■□□ 2.12
SNAPC4Q5SXM2 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
SNAPC4Q5SXM2 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
SNAPC4Q5SXM2 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
SNAPC4Q5SXM2 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
SNAPC4Q5SXM2 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
SNAPC4Q5SXM2 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
SNAPC4Q5SXM2 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
SNAPC4Q5SXM2 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC28.27■■■□□ 2.12
SNAPC4Q5SXM2 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC28.27■■■□□ 2.12
SNAPC4Q5SXM2 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC28.27■■■□□ 2.12
SNAPC4Q5SXM2 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
SNAPC4Q5SXM2 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
SNAPC4Q5SXM2 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC28.27■■■□□ 2.12
SNAPC4Q5SXM2 AP000842.3-202ENST00000569238 1080 ntBASIC28.27■■■□□ 2.12
SNAPC4Q5SXM2 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
SNAPC4Q5SXM2 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
SNAPC4Q5SXM2 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
SNAPC4Q5SXM2 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
SNAPC4Q5SXM2 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
SNAPC4Q5SXM2 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
SNAPC4Q5SXM2 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
SNAPC4Q5SXM2 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC28.26■■■□□ 2.11
SNAPC4Q5SXM2 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC28.26■■■□□ 2.11
SNAPC4Q5SXM2 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC28.26■■■□□ 2.11
SNAPC4Q5SXM2 IGHV3-72-202ENST00000621503 303 ntBASIC28.26■■■□□ 2.11
SNAPC4Q5SXM2 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC28.26■■■□□ 2.11
SNAPC4Q5SXM2 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
SNAPC4Q5SXM2 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC28.25■■■□□ 2.11
SNAPC4Q5SXM2 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
SNAPC4Q5SXM2 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC28.25■■■□□ 2.11
SNAPC4Q5SXM2 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC28.25■■■□□ 2.11
SNAPC4Q5SXM2 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
SNAPC4Q5SXM2 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
SNAPC4Q5SXM2 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
SNAPC4Q5SXM2 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
SNAPC4Q5SXM2 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC28.25■■■□□ 2.11
SNAPC4Q5SXM2 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC28.25■■■□□ 2.11
SNAPC4Q5SXM2 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC28.25■■■□□ 2.11
SNAPC4Q5SXM2 AC109635.5-201ENST00000533593 962 ntBASIC28.25■■■□□ 2.11
SNAPC4Q5SXM2 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC28.25■■■□□ 2.11
SNAPC4Q5SXM2 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC28.25■■■□□ 2.11
SNAPC4Q5SXM2 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC28.25■■■□□ 2.11
SNAPC4Q5SXM2 AL590560.3-201ENST00000623350 461 ntBASIC28.25■■■□□ 2.11
SNAPC4Q5SXM2 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC28.25■■■□□ 2.11
SNAPC4Q5SXM2 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC28.25■■■□□ 2.11
SNAPC4Q5SXM2 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
SNAPC4Q5SXM2 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
SNAPC4Q5SXM2 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC28.24■■■□□ 2.11
SNAPC4Q5SXM2 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
SNAPC4Q5SXM2 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC28.24■■■□□ 2.11
SNAPC4Q5SXM2 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
SNAPC4Q5SXM2 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
SNAPC4Q5SXM2 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
SNAPC4Q5SXM2 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
SNAPC4Q5SXM2 AC079776.1-201ENST00000401540 1152 ntBASIC28.24■■■□□ 2.11
SNAPC4Q5SXM2 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC28.24■■■□□ 2.11
SNAPC4Q5SXM2 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC28.24■■■□□ 2.11
SNAPC4Q5SXM2 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC28.24■■■□□ 2.11
SNAPC4Q5SXM2 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC28.24■■■□□ 2.11
SNAPC4Q5SXM2 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC28.24■■■□□ 2.11
SNAPC4Q5SXM2 AC004233.3-201ENST00000607794 1269 ntBASIC28.24■■■□□ 2.11
SNAPC4Q5SXM2 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
SNAPC4Q5SXM2 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
SNAPC4Q5SXM2 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC28.24■■■□□ 2.11
SNAPC4Q5SXM2 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC28.24■■■□□ 2.11
SNAPC4Q5SXM2 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms