Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
SNAP47Q5SQN1 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
SNAP47Q5SQN1 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNAP47Q5SQN1 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNAP47Q5SQN1 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNAP47Q5SQN1 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.07■□□□□ 0.32
SNAP47Q5SQN1 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
SNAP47Q5SQN1 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SNAP47Q5SQN1 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.07■□□□□ 0.32
SNAP47Q5SQN1 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNAP47Q5SQN1 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNAP47Q5SQN1 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNAP47Q5SQN1 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNAP47Q5SQN1 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNAP47Q5SQN1 SOD2-201ENST00000337404 991 ntTSL 2 BASIC17.07■□□□□ 0.32
SNAP47Q5SQN1 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
SNAP47Q5SQN1 MIR574-201ENST00000385209 96 ntBASIC17.07■□□□□ 0.32
SNAP47Q5SQN1 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.07■□□□□ 0.32
SNAP47Q5SQN1 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SNAP47Q5SQN1 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.07■□□□□ 0.32
SNAP47Q5SQN1 OR7E14P-202ENST00000530490 1290 ntBASIC17.07■□□□□ 0.32
SNAP47Q5SQN1 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNAP47Q5SQN1 NKAPP1-205ENST00000585790 367 ntBASIC17.07■□□□□ 0.32
SNAP47Q5SQN1 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
SNAP47Q5SQN1 AL671883.3-201ENST00000603274 991 ntBASIC17.07■□□□□ 0.32
SNAP47Q5SQN1 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SNAP47Q5SQN1 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
SNAP47Q5SQN1 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNAP47Q5SQN1 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
SNAP47Q5SQN1 AC135776.1-201ENST00000319817 2481 ntBASIC17.07■□□□□ 0.32
SNAP47Q5SQN1 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNAP47Q5SQN1 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SNAP47Q5SQN1 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SNAP47Q5SQN1 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SNAP47Q5SQN1 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SNAP47Q5SQN1 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
SNAP47Q5SQN1 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.06■□□□□ 0.32
SNAP47Q5SQN1 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNAP47Q5SQN1 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SNAP47Q5SQN1 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SNAP47Q5SQN1 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNAP47Q5SQN1 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNAP47Q5SQN1 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC17.06■□□□□ 0.32
SNAP47Q5SQN1 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SNAP47Q5SQN1 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SNAP47Q5SQN1 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNAP47Q5SQN1 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
SNAP47Q5SQN1 PMS2P1-201ENST00000431037 1228 ntBASIC17.06■□□□□ 0.32
SNAP47Q5SQN1 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.06■□□□□ 0.32
SNAP47Q5SQN1 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNAP47Q5SQN1 BX005266.1-201ENST00000473402 457 ntBASIC17.06■□□□□ 0.32
SNAP47Q5SQN1 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNAP47Q5SQN1 AC092910.1-201ENST00000482027 1129 ntBASIC17.06■□□□□ 0.32
SNAP47Q5SQN1 POLD2P1-201ENST00000511220 997 ntBASIC17.06■□□□□ 0.32
SNAP47Q5SQN1 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.06■□□□□ 0.32
SNAP47Q5SQN1 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNAP47Q5SQN1 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SNAP47Q5SQN1 PNMT-203ENST00000581428 677 ntTSL 2 BASIC17.06■□□□□ 0.32
SNAP47Q5SQN1 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.06■□□□□ 0.32
SNAP47Q5SQN1 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SNAP47Q5SQN1 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNAP47Q5SQN1 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.06■□□□□ 0.32
SNAP47Q5SQN1 AC009113.1-201ENST00000570267 2443 ntBASIC17.06■□□□□ 0.32
SNAP47Q5SQN1 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNAP47Q5SQN1 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNAP47Q5SQN1 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SNAP47Q5SQN1 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SNAP47Q5SQN1 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SNAP47Q5SQN1 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SNAP47Q5SQN1 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNAP47Q5SQN1 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SNAP47Q5SQN1 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNAP47Q5SQN1 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNAP47Q5SQN1 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.05■□□□□ 0.32
SNAP47Q5SQN1 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNAP47Q5SQN1 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.05■□□□□ 0.32
SNAP47Q5SQN1 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNAP47Q5SQN1 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
SNAP47Q5SQN1 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SNAP47Q5SQN1 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
SNAP47Q5SQN1 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.05■□□□□ 0.32
SNAP47Q5SQN1 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNAP47Q5SQN1 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNAP47Q5SQN1 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.05■□□□□ 0.32
SNAP47Q5SQN1 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SNAP47Q5SQN1 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.05■□□□□ 0.32
SNAP47Q5SQN1 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.05■□□□□ 0.32
SNAP47Q5SQN1 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SNAP47Q5SQN1 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC17.05■□□□□ 0.32
SNAP47Q5SQN1 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
SNAP47Q5SQN1 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.05■□□□□ 0.32
SNAP47Q5SQN1 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.05■□□□□ 0.32
SNAP47Q5SQN1 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.05■□□□□ 0.32
SNAP47Q5SQN1 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.05■□□□□ 0.32
SNAP47Q5SQN1 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.05■□□□□ 0.32
SNAP47Q5SQN1 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC17.05■□□□□ 0.32
SNAP47Q5SQN1 MTDHP4-201ENST00000600287 670 ntBASIC17.05■□□□□ 0.32
SNAP47Q5SQN1 AL139288.1-201ENST00000623748 933 ntBASIC17.05■□□□□ 0.32
SNAP47Q5SQN1 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SNAP47Q5SQN1 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms