Protein–RNA interactions for Protein: Q5BJE1

CCDC178, Coiled-coil domain-containing protein 178, humanhuman

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178Q5BJE1 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.49■□□□□ 0.87
CCDC178Q5BJE1 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC20.49■□□□□ 0.87
CCDC178Q5BJE1 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.49■□□□□ 0.87
CCDC178Q5BJE1 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC20.49■□□□□ 0.87
CCDC178Q5BJE1 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC20.49■□□□□ 0.87
CCDC178Q5BJE1 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.49■□□□□ 0.87
CCDC178Q5BJE1 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC20.49■□□□□ 0.87
CCDC178Q5BJE1 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
CCDC178Q5BJE1 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC178Q5BJE1 AL355312.1-201ENST00000407115 2176 ntBASIC20.49■□□□□ 0.87
CCDC178Q5BJE1 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC178Q5BJE1 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC20.49■□□□□ 0.87
CCDC178Q5BJE1 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CCDC178Q5BJE1 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC178Q5BJE1 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
CCDC178Q5BJE1 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC178Q5BJE1 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC20.48■□□□□ 0.87
CCDC178Q5BJE1 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC178Q5BJE1 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
CCDC178Q5BJE1 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC178Q5BJE1 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC178Q5BJE1 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC178Q5BJE1 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC178Q5BJE1 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC178Q5BJE1 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC178Q5BJE1 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC178Q5BJE1 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC20.48■□□□□ 0.87
CCDC178Q5BJE1 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC20.48■□□□□ 0.87
CCDC178Q5BJE1 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC178Q5BJE1 AC009078.2-202ENST00000463353 338 ntBASIC20.48■□□□□ 0.87
CCDC178Q5BJE1 S100A2-206ENST00000497140 697 ntTSL 2 BASIC20.48■□□□□ 0.87
CCDC178Q5BJE1 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.48■□□□□ 0.87
CCDC178Q5BJE1 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
CCDC178Q5BJE1 PNMT-203ENST00000581428 677 ntTSL 2 BASIC20.48■□□□□ 0.87
CCDC178Q5BJE1 SLC25A6P4-201ENST00000586535 553 ntBASIC20.48■□□□□ 0.87
CCDC178Q5BJE1 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CCDC178Q5BJE1 AC025062.2-201ENST00000605477 670 ntBASIC20.48■□□□□ 0.87
CCDC178Q5BJE1 AL589182.2-201ENST00000619332 1049 ntBASIC20.48■□□□□ 0.87
CCDC178Q5BJE1 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CCDC178Q5BJE1 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC178Q5BJE1 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC178Q5BJE1 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC178Q5BJE1 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC178Q5BJE1 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC178Q5BJE1 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
CCDC178Q5BJE1 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
CCDC178Q5BJE1 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.47■□□□□ 0.87
CCDC178Q5BJE1 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
CCDC178Q5BJE1 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC20.47■□□□□ 0.87
CCDC178Q5BJE1 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC178Q5BJE1 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.47■□□□□ 0.87
CCDC178Q5BJE1 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC20.47■□□□□ 0.87
CCDC178Q5BJE1 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC20.47■□□□□ 0.87
CCDC178Q5BJE1 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
CCDC178Q5BJE1 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC178Q5BJE1 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC178Q5BJE1 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC20.47■□□□□ 0.87
CCDC178Q5BJE1 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
CCDC178Q5BJE1 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
CCDC178Q5BJE1 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC20.47■□□□□ 0.87
CCDC178Q5BJE1 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC178Q5BJE1 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CCDC178Q5BJE1 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CCDC178Q5BJE1 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC178Q5BJE1 RNF151-202ENST00000569210 853 ntTSL 2 BASIC20.47■□□□□ 0.87
CCDC178Q5BJE1 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC20.47■□□□□ 0.87
CCDC178Q5BJE1 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CCDC178Q5BJE1 AC046185.3-201ENST00000623228 1824 ntBASIC20.47■□□□□ 0.87
CCDC178Q5BJE1 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC178Q5BJE1 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC178Q5BJE1 AC134043.2-201ENST00000624206 2238 ntBASIC20.47■□□□□ 0.87
CCDC178Q5BJE1 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC178Q5BJE1 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CCDC178Q5BJE1 GID4-202ENST00000376345 1391 ntTSL 3 BASIC20.46■□□□□ 0.87
CCDC178Q5BJE1 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC178Q5BJE1 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC178Q5BJE1 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC178Q5BJE1 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC178Q5BJE1 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC178Q5BJE1 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
CCDC178Q5BJE1 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC178Q5BJE1 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC178Q5BJE1 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC20.46■□□□□ 0.87
CCDC178Q5BJE1 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC20.46■□□□□ 0.87
CCDC178Q5BJE1 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC178Q5BJE1 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC20.46■□□□□ 0.87
CCDC178Q5BJE1 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CCDC178Q5BJE1 MRPL3P1-201ENST00000400109 1033 ntBASIC20.46■□□□□ 0.87
CCDC178Q5BJE1 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20.46■□□□□ 0.87
CCDC178Q5BJE1 AL031284.1-201ENST00000419297 478 ntBASIC20.46■□□□□ 0.87
CCDC178Q5BJE1 LAGE3P1-201ENST00000425356 484 ntBASIC20.46■□□□□ 0.87
CCDC178Q5BJE1 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC20.46■□□□□ 0.87
CCDC178Q5BJE1 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.46■□□□□ 0.87
CCDC178Q5BJE1 OR7E14P-202ENST00000530490 1290 ntBASIC20.46■□□□□ 0.87
CCDC178Q5BJE1 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
CCDC178Q5BJE1 AC139887.3-201ENST00000568585 713 ntBASIC20.46■□□□□ 0.87
CCDC178Q5BJE1 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC20.46■□□□□ 0.87
CCDC178Q5BJE1 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC20.46■□□□□ 0.87
CCDC178Q5BJE1 AC107918.4-202ENST00000641623 219 ntBASIC20.46■□□□□ 0.87
CCDC178Q5BJE1 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms