Protein–RNA interactions for Protein: Q53TQ3

INO80D, INO80 complex subunit D, humanhuman

Predicted RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
INO80DQ53TQ3 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
INO80DQ53TQ3 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
INO80DQ53TQ3 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
INO80DQ53TQ3 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
INO80DQ53TQ3 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
INO80DQ53TQ3 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
INO80DQ53TQ3 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
INO80DQ53TQ3 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
INO80DQ53TQ3 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
INO80DQ53TQ3 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
INO80DQ53TQ3 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.44
INO80DQ53TQ3 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
INO80DQ53TQ3 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
INO80DQ53TQ3 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.77■□□□□ 0.44
INO80DQ53TQ3 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
INO80DQ53TQ3 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
INO80DQ53TQ3 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
INO80DQ53TQ3 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
INO80DQ53TQ3 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.77■□□□□ 0.44
INO80DQ53TQ3 FAM197Y8-203ENST00000450145 560 ntBASIC17.77■□□□□ 0.44
INO80DQ53TQ3 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
INO80DQ53TQ3 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.77■□□□□ 0.44
INO80DQ53TQ3 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.77■□□□□ 0.44
INO80DQ53TQ3 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC17.77■□□□□ 0.44
INO80DQ53TQ3 TP73-AS1-207ENST00000624167 988 ntBASIC17.77■□□□□ 0.44
INO80DQ53TQ3 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
INO80DQ53TQ3 AL022326.1-202ENST00000641533 845 ntBASIC17.77■□□□□ 0.44
INO80DQ53TQ3 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
INO80DQ53TQ3 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.77■□□□□ 0.44
INO80DQ53TQ3 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
INO80DQ53TQ3 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
INO80DQ53TQ3 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
INO80DQ53TQ3 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
INO80DQ53TQ3 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.77■□□□□ 0.44
INO80DQ53TQ3 AC018470.1-201ENST00000624790 3129 ntBASIC17.77■□□□□ 0.43
INO80DQ53TQ3 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
INO80DQ53TQ3 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
INO80DQ53TQ3 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
INO80DQ53TQ3 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
INO80DQ53TQ3 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
INO80DQ53TQ3 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
INO80DQ53TQ3 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
INO80DQ53TQ3 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
INO80DQ53TQ3 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
INO80DQ53TQ3 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
INO80DQ53TQ3 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
INO80DQ53TQ3 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.77■□□□□ 0.43
INO80DQ53TQ3 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.77■□□□□ 0.43
INO80DQ53TQ3 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.77■□□□□ 0.43
INO80DQ53TQ3 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
INO80DQ53TQ3 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
INO80DQ53TQ3 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
INO80DQ53TQ3 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
INO80DQ53TQ3 OR6D1P-202ENST00000641007 5290 ntBASIC17.76■□□□□ 0.43
INO80DQ53TQ3 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.76■□□□□ 0.43
INO80DQ53TQ3 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
INO80DQ53TQ3 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
INO80DQ53TQ3 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
INO80DQ53TQ3 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.76■□□□□ 0.43
INO80DQ53TQ3 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
INO80DQ53TQ3 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
INO80DQ53TQ3 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
INO80DQ53TQ3 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.76■□□□□ 0.43
INO80DQ53TQ3 KRT18P67-201ENST00000432816 1264 ntBASIC17.76■□□□□ 0.43
INO80DQ53TQ3 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.76■□□□□ 0.43
INO80DQ53TQ3 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.76■□□□□ 0.43
INO80DQ53TQ3 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.76■□□□□ 0.43
INO80DQ53TQ3 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC17.76■□□□□ 0.43
INO80DQ53TQ3 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.76■□□□□ 0.43
INO80DQ53TQ3 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
INO80DQ53TQ3 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
INO80DQ53TQ3 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
INO80DQ53TQ3 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.76■□□□□ 0.43
INO80DQ53TQ3 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
INO80DQ53TQ3 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
INO80DQ53TQ3 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
INO80DQ53TQ3 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
INO80DQ53TQ3 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
INO80DQ53TQ3 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
INO80DQ53TQ3 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.75■□□□□ 0.43
INO80DQ53TQ3 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.75■□□□□ 0.43
INO80DQ53TQ3 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.75■□□□□ 0.43
INO80DQ53TQ3 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
INO80DQ53TQ3 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
INO80DQ53TQ3 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
INO80DQ53TQ3 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
INO80DQ53TQ3 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
INO80DQ53TQ3 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
INO80DQ53TQ3 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.75■□□□□ 0.43
INO80DQ53TQ3 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
INO80DQ53TQ3 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.75■□□□□ 0.43
INO80DQ53TQ3 AF186996.4-201ENST00000467186 377 ntBASIC17.75■□□□□ 0.43
INO80DQ53TQ3 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.75■□□□□ 0.43
INO80DQ53TQ3 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
INO80DQ53TQ3 RNPS1P1-201ENST00000507437 918 ntBASIC17.75■□□□□ 0.43
INO80DQ53TQ3 AC073648.2-201ENST00000510116 352 ntBASIC17.75■□□□□ 0.43
INO80DQ53TQ3 AL662844.1-201ENST00000546340 181 ntBASIC17.75■□□□□ 0.43
INO80DQ53TQ3 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.75■□□□□ 0.43
INO80DQ53TQ3 AC021087.4-201ENST00000563761 564 ntBASIC17.75■□□□□ 0.43
INO80DQ53TQ3 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms