Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PTPN20Q4JDL3 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PTPN20Q4JDL3 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.43■□□□□ 0.54
PTPN20Q4JDL3 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.43■□□□□ 0.54
PTPN20Q4JDL3 KRT16P4-201ENST00000453883 522 ntBASIC18.43■□□□□ 0.54
PTPN20Q4JDL3 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.43■□□□□ 0.54
PTPN20Q4JDL3 PRR29-207ENST00000580752 458 ntTSL 3 BASIC18.43■□□□□ 0.54
PTPN20Q4JDL3 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.43■□□□□ 0.54
PTPN20Q4JDL3 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.43■□□□□ 0.54
PTPN20Q4JDL3 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN20Q4JDL3 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
PTPN20Q4JDL3 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN20Q4JDL3 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.43■□□□□ 0.54
PTPN20Q4JDL3 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.43■□□□□ 0.54
PTPN20Q4JDL3 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
PTPN20Q4JDL3 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN20Q4JDL3 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.43■□□□□ 0.54
PTPN20Q4JDL3 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN20Q4JDL3 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
PTPN20Q4JDL3 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTPN20Q4JDL3 AC009336.1-201ENST00000608941 1553 ntBASIC18.42■□□□□ 0.54
PTPN20Q4JDL3 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTPN20Q4JDL3 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTPN20Q4JDL3 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.42■□□□□ 0.54
PTPN20Q4JDL3 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.42■□□□□ 0.54
PTPN20Q4JDL3 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
PTPN20Q4JDL3 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTPN20Q4JDL3 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.42■□□□□ 0.54
PTPN20Q4JDL3 LTB4R2-202ENST00000528054 3092 ntBASIC18.42■□□□□ 0.54
PTPN20Q4JDL3 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTPN20Q4JDL3 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.42■□□□□ 0.54
PTPN20Q4JDL3 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTPN20Q4JDL3 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PTPN20Q4JDL3 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTPN20Q4JDL3 AC003669.1-201ENST00000334569 611 ntBASIC18.42■□□□□ 0.54
PTPN20Q4JDL3 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PTPN20Q4JDL3 TSPY19P-201ENST00000418461 509 ntBASIC18.42■□□□□ 0.54
PTPN20Q4JDL3 TSPY18P-201ENST00000441642 509 ntBASIC18.42■□□□□ 0.54
PTPN20Q4JDL3 NKTR-203ENST00000442970 646 ntTSL 2 BASIC18.42■□□□□ 0.54
PTPN20Q4JDL3 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.42■□□□□ 0.54
PTPN20Q4JDL3 RBSN-204ENST00000449050 903 ntTSL 2 BASIC18.42■□□□□ 0.54
PTPN20Q4JDL3 COX5A-204ENST00000567270 579 ntTSL 3 BASIC18.42■□□□□ 0.54
PTPN20Q4JDL3 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTPN20Q4JDL3 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
PTPN20Q4JDL3 CLEC4GP1-201ENST00000596555 870 ntBASIC18.42■□□□□ 0.54
PTPN20Q4JDL3 AL732292.2-201ENST00000609649 430 ntBASIC18.42■□□□□ 0.54
PTPN20Q4JDL3 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTPN20Q4JDL3 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTPN20Q4JDL3 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTPN20Q4JDL3 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
PTPN20Q4JDL3 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN20Q4JDL3 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.41■□□□□ 0.54
PTPN20Q4JDL3 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN20Q4JDL3 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN20Q4JDL3 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN20Q4JDL3 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN20Q4JDL3 AC016396.2-201ENST00000562575 1417 ntBASIC18.41■□□□□ 0.54
PTPN20Q4JDL3 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
PTPN20Q4JDL3 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC18.41■□□□□ 0.54
PTPN20Q4JDL3 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN20Q4JDL3 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
PTPN20Q4JDL3 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC18.41■□□□□ 0.54
PTPN20Q4JDL3 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN20Q4JDL3 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
PTPN20Q4JDL3 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
PTPN20Q4JDL3 EMD-201ENST00000369835 966 ntTSL 3 BASIC18.41■□□□□ 0.54
PTPN20Q4JDL3 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN20Q4JDL3 SLC25A1P3-201ENST00000395415 828 ntBASIC18.41■□□□□ 0.54
PTPN20Q4JDL3 KLF4P1-201ENST00000412782 1185 ntBASIC18.41■□□□□ 0.54
PTPN20Q4JDL3 ABCD1P5-201ENST00000445663 754 ntBASIC18.41■□□□□ 0.54
PTPN20Q4JDL3 KRT18P31-201ENST00000506277 1292 ntBASIC18.41■□□□□ 0.54
PTPN20Q4JDL3 STK19B-204ENST00000512515 211 ntBASIC18.41■□□□□ 0.54
PTPN20Q4JDL3 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC18.41■□□□□ 0.54
PTPN20Q4JDL3 PRELID1P1-202ENST00000567272 903 ntBASIC18.41■□□□□ 0.54
PTPN20Q4JDL3 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.41■□□□□ 0.54
PTPN20Q4JDL3 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN20Q4JDL3 AP001269.4-201ENST00000609611 512 ntBASIC18.41■□□□□ 0.54
PTPN20Q4JDL3 AC012313.1-201ENST00000593393 3059 ntBASIC18.41■□□□□ 0.54
PTPN20Q4JDL3 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN20Q4JDL3 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.41■□□□□ 0.54
PTPN20Q4JDL3 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
PTPN20Q4JDL3 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN20Q4JDL3 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PTPN20Q4JDL3 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PTPN20Q4JDL3 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
PTPN20Q4JDL3 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PTPN20Q4JDL3 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTPN20Q4JDL3 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PTPN20Q4JDL3 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTPN20Q4JDL3 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PTPN20Q4JDL3 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PTPN20Q4JDL3 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.4■□□□□ 0.54
PTPN20Q4JDL3 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTPN20Q4JDL3 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTPN20Q4JDL3 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PTPN20Q4JDL3 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
PTPN20Q4JDL3 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.4■□□□□ 0.54
PTPN20Q4JDL3 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.4■□□□□ 0.54
PTPN20Q4JDL3 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
PTPN20Q4JDL3 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms