Protein–RNA interactions for Protein: Q0VAF6

SYCN, Syncollin, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCNQ0VAF6 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SYCNQ0VAF6 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
SYCNQ0VAF6 HARS-201ENST00000307633 1780 ntTSL 2 BASIC11.62□□□□□ -0.55
SYCNQ0VAF6 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SYCNQ0VAF6 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SYCNQ0VAF6 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.55
SYCNQ0VAF6 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC11.62□□□□□ -0.55
SYCNQ0VAF6 CEP83-AS1-201ENST00000623122 2482 ntBASIC11.62□□□□□ -0.55
SYCNQ0VAF6 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC11.62□□□□□ -0.55
SYCNQ0VAF6 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SYCNQ0VAF6 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SYCNQ0VAF6 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SYCNQ0VAF6 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
SYCNQ0VAF6 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SYCNQ0VAF6 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC11.62□□□□□ -0.55
SYCNQ0VAF6 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC11.62□□□□□ -0.55
SYCNQ0VAF6 AL645929.1-201ENST00000420084 975 ntBASIC11.62□□□□□ -0.55
SYCNQ0VAF6 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC11.62□□□□□ -0.55
SYCNQ0VAF6 DAP-202ENST00000432074 1048 ntTSL 2 BASIC11.62□□□□□ -0.55
SYCNQ0VAF6 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC11.62□□□□□ -0.55
SYCNQ0VAF6 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC11.62□□□□□ -0.55
SYCNQ0VAF6 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC11.62□□□□□ -0.55
SYCNQ0VAF6 AC068472.1-201ENST00000474589 881 ntBASIC11.62□□□□□ -0.55
SYCNQ0VAF6 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC11.62□□□□□ -0.55
SYCNQ0VAF6 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC11.62□□□□□ -0.55
SYCNQ0VAF6 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC11.62□□□□□ -0.55
SYCNQ0VAF6 HYMAI.1-201ENST00000620949 238 ntBASIC11.62□□□□□ -0.55
SYCNQ0VAF6 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC11.62□□□□□ -0.55
SYCNQ0VAF6 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
SYCNQ0VAF6 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC11.62□□□□□ -0.55
SYCNQ0VAF6 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SYCNQ0VAF6 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SYCNQ0VAF6 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC11.62□□□□□ -0.55
SYCNQ0VAF6 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
SYCNQ0VAF6 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
SYCNQ0VAF6 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC11.62□□□□□ -0.55
SYCNQ0VAF6 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
SYCNQ0VAF6 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC11.62□□□□□ -0.55
SYCNQ0VAF6 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC11.62□□□□□ -0.55
SYCNQ0VAF6 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC11.62□□□□□ -0.55
SYCNQ0VAF6 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
SYCNQ0VAF6 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SYCNQ0VAF6 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC11.62□□□□□ -0.55
SYCNQ0VAF6 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SYCNQ0VAF6 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
SYCNQ0VAF6 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SYCNQ0VAF6 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC11.62□□□□□ -0.55
SYCNQ0VAF6 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
SYCNQ0VAF6 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
SYCNQ0VAF6 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SYCNQ0VAF6 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
SYCNQ0VAF6 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SYCNQ0VAF6 UBC-206ENST00000538617 1303 ntTSL 5 BASIC11.61□□□□□ -0.55
SYCNQ0VAF6 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
SYCNQ0VAF6 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
SYCNQ0VAF6 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC11.61□□□□□ -0.55
SYCNQ0VAF6 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SYCNQ0VAF6 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC11.61□□□□□ -0.55
SYCNQ0VAF6 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
SYCNQ0VAF6 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC11.61□□□□□ -0.55
SYCNQ0VAF6 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SYCNQ0VAF6 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
SYCNQ0VAF6 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC11.61□□□□□ -0.55
SYCNQ0VAF6 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SYCNQ0VAF6 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SYCNQ0VAF6 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
SYCNQ0VAF6 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC11.61□□□□□ -0.55
SYCNQ0VAF6 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
SYCNQ0VAF6 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SYCNQ0VAF6 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SYCNQ0VAF6 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
SYCNQ0VAF6 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SYCNQ0VAF6 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SYCNQ0VAF6 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SYCNQ0VAF6 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC11.61□□□□□ -0.55
SYCNQ0VAF6 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SYCNQ0VAF6 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
SYCNQ0VAF6 RCN1P1-201ENST00000400413 996 ntBASIC11.61□□□□□ -0.55
SYCNQ0VAF6 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC11.61□□□□□ -0.55
SYCNQ0VAF6 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SYCNQ0VAF6 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SYCNQ0VAF6 SAPCD2P2-201ENST00000431719 1174 ntBASIC11.61□□□□□ -0.55
SYCNQ0VAF6 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SYCNQ0VAF6 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC11.61□□□□□ -0.55
SYCNQ0VAF6 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC11.61□□□□□ -0.55
SYCNQ0VAF6 LTBR-211ENST00000543190 785 ntTSL 3 BASIC11.61□□□□□ -0.55
SYCNQ0VAF6 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC11.61□□□□□ -0.55
SYCNQ0VAF6 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
SYCNQ0VAF6 DFFB-212ENST00000625756 649 ntTSL 5 BASIC11.61□□□□□ -0.55
SYCNQ0VAF6 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC11.61□□□□□ -0.55
SYCNQ0VAF6 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
SYCNQ0VAF6 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
SYCNQ0VAF6 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SYCNQ0VAF6 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SYCNQ0VAF6 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC11.61□□□□□ -0.55
SYCNQ0VAF6 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC11.61□□□□□ -0.55
SYCNQ0VAF6 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC11.61□□□□□ -0.55
SYCNQ0VAF6 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
SYCNQ0VAF6 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
SYCNQ0VAF6 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms