Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
KCNA1Q09470 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
KCNA1Q09470 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.24■□□□□ 0.67
KCNA1Q09470 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
KCNA1Q09470 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
KCNA1Q09470 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KCNA1Q09470 AKR1C7P-201ENST00000305623 895 ntBASIC19.24■□□□□ 0.67
KCNA1Q09470 DFFB-203ENST00000341385 572 ntTSL 5 BASIC19.24■□□□□ 0.67
KCNA1Q09470 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
KCNA1Q09470 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC19.24■□□□□ 0.67
KCNA1Q09470 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
KCNA1Q09470 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC19.24■□□□□ 0.67
KCNA1Q09470 ABCD1P5-201ENST00000445663 754 ntBASIC19.24■□□□□ 0.67
KCNA1Q09470 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.24■□□□□ 0.67
KCNA1Q09470 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.24■□□□□ 0.67
KCNA1Q09470 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC19.24■□□□□ 0.67
KCNA1Q09470 AC073592.5-201ENST00000624854 528 ntBASIC19.24■□□□□ 0.67
KCNA1Q09470 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
KCNA1Q09470 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.24■□□□□ 0.67
KCNA1Q09470 AC148477.5-201ENST00000625164 1645 ntBASIC19.24■□□□□ 0.67
KCNA1Q09470 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.24■□□□□ 0.67
KCNA1Q09470 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KCNA1Q09470 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.24■□□□□ 0.67
KCNA1Q09470 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
KCNA1Q09470 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
KCNA1Q09470 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.24■□□□□ 0.67
KCNA1Q09470 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
KCNA1Q09470 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KCNA1Q09470 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
KCNA1Q09470 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
KCNA1Q09470 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
KCNA1Q09470 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
KCNA1Q09470 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
KCNA1Q09470 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KCNA1Q09470 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KCNA1Q09470 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC19.23■□□□□ 0.67
KCNA1Q09470 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KCNA1Q09470 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KCNA1Q09470 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC19.23■□□□□ 0.67
KCNA1Q09470 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KCNA1Q09470 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KCNA1Q09470 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KCNA1Q09470 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC19.23■□□□□ 0.67
KCNA1Q09470 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KCNA1Q09470 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KCNA1Q09470 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
KCNA1Q09470 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KCNA1Q09470 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KCNA1Q09470 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
KCNA1Q09470 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.23■□□□□ 0.67
KCNA1Q09470 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.23■□□□□ 0.67
KCNA1Q09470 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.23■□□□□ 0.67
KCNA1Q09470 IGHV3-52-201ENST00000519770 353 ntBASIC19.23■□□□□ 0.67
KCNA1Q09470 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.23■□□□□ 0.67
KCNA1Q09470 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
KCNA1Q09470 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC19.23■□□□□ 0.67
KCNA1Q09470 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
KCNA1Q09470 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
KCNA1Q09470 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.23■□□□□ 0.67
KCNA1Q09470 AC004817.3-201ENST00000602957 2129 ntBASIC19.23■□□□□ 0.67
KCNA1Q09470 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC19.23■□□□□ 0.67
KCNA1Q09470 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
KCNA1Q09470 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC19.23■□□□□ 0.67
KCNA1Q09470 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.23■□□□□ 0.67
KCNA1Q09470 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
KCNA1Q09470 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
KCNA1Q09470 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
KCNA1Q09470 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KCNA1Q09470 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
KCNA1Q09470 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
KCNA1Q09470 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.22■□□□□ 0.67
KCNA1Q09470 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.22■□□□□ 0.67
KCNA1Q09470 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
KCNA1Q09470 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KCNA1Q09470 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KCNA1Q09470 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC19.22■□□□□ 0.67
KCNA1Q09470 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.22■□□□□ 0.67
KCNA1Q09470 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KCNA1Q09470 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KCNA1Q09470 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
KCNA1Q09470 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
KCNA1Q09470 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
KCNA1Q09470 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC19.22■□□□□ 0.67
KCNA1Q09470 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC19.22■□□□□ 0.67
KCNA1Q09470 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
KCNA1Q09470 IFNL4P1-201ENST00000607083 540 ntBASIC19.22■□□□□ 0.67
KCNA1Q09470 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KCNA1Q09470 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KCNA1Q09470 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
KCNA1Q09470 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.22■□□□□ 0.67
KCNA1Q09470 AP005117.1-201ENST00000584346 1413 ntBASIC19.22■□□□□ 0.67
KCNA1Q09470 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KCNA1Q09470 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KCNA1Q09470 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KCNA1Q09470 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
KCNA1Q09470 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
KCNA1Q09470 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
KCNA1Q09470 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
KCNA1Q09470 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
KCNA1Q09470 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms