Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEP78395 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEP78395 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEP78395 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEP78395 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEP78395 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.69■□□□□ 0.42
PRAMEP78395 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEP78395 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.69■□□□□ 0.42
PRAMEP78395 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PRAMEP78395 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC17.69■□□□□ 0.42
PRAMEP78395 AL023806.1-201ENST00000603994 1649 ntBASIC17.69■□□□□ 0.42
PRAMEP78395 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PRAMEP78395 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEP78395 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.68■□□□□ 0.42
PRAMEP78395 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEP78395 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEP78395 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.68■□□□□ 0.42
PRAMEP78395 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PRAMEP78395 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.68■□□□□ 0.42
PRAMEP78395 PCDHA12-202ENST00000613593 2588 ntBASIC17.68■□□□□ 0.42
PRAMEP78395 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEP78395 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.68■□□□□ 0.42
PRAMEP78395 PCED1CP-201ENST00000419887 785 ntBASIC17.68■□□□□ 0.42
PRAMEP78395 CHCHD2P8-201ENST00000429873 447 ntBASIC17.68■□□□□ 0.42
PRAMEP78395 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEP78395 VENTXP7-201ENST00000475503 772 ntBASIC17.68■□□□□ 0.42
PRAMEP78395 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.68■□□□□ 0.42
PRAMEP78395 AC010460.3-201ENST00000511359 1579 ntBASIC17.68■□□□□ 0.42
PRAMEP78395 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEP78395 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEP78395 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.68■□□□□ 0.42
PRAMEP78395 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEP78395 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
PRAMEP78395 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.68■□□□□ 0.42
PRAMEP78395 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEP78395 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEP78395 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEP78395 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.68■□□□□ 0.42
PRAMEP78395 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PRAMEP78395 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PRAMEP78395 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PRAMEP78395 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
PRAMEP78395 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.68■□□□□ 0.42
PRAMEP78395 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEP78395 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEP78395 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.67■□□□□ 0.42
PRAMEP78395 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PRAMEP78395 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEP78395 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEP78395 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEP78395 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEP78395 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PRAMEP78395 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEP78395 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEP78395 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEP78395 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
PRAMEP78395 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.67■□□□□ 0.42
PRAMEP78395 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEP78395 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEP78395 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEP78395 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEP78395 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.67■□□□□ 0.42
PRAMEP78395 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEP78395 AC005104.2-201ENST00000427818 678 ntBASIC17.67■□□□□ 0.42
PRAMEP78395 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.67■□□□□ 0.42
PRAMEP78395 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEP78395 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC17.67■□□□□ 0.42
PRAMEP78395 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
PRAMEP78395 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.67■□□□□ 0.42
PRAMEP78395 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEP78395 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
PRAMEP78395 AC116407.4-201ENST00000623319 1061 ntBASIC17.67■□□□□ 0.42
PRAMEP78395 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEP78395 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
PRAMEP78395 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PRAMEP78395 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEP78395 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.67■□□□□ 0.42
PRAMEP78395 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.67■□□□□ 0.42
PRAMEP78395 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.67■□□□□ 0.42
PRAMEP78395 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEP78395 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEP78395 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.67■□□□□ 0.42
PRAMEP78395 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEP78395 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEP78395 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEP78395 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEP78395 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEP78395 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEP78395 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEP78395 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEP78395 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PRAMEP78395 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.67■□□□□ 0.42
PRAMEP78395 AL645608.8-201ENST00000606034 2086 ntBASIC17.67■□□□□ 0.42
PRAMEP78395 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRAMEP78395 IER3-202ENST00000376377 1350 ntBASIC17.66■□□□□ 0.42
PRAMEP78395 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PRAMEP78395 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRAMEP78395 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
PRAMEP78395 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PRAMEP78395 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms