Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SRP54P61011 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.29■□□□□ 0.36
SRP54P61011 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
SRP54P61011 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRP54P61011 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRP54P61011 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRP54P61011 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRP54P61011 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
SRP54P61011 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRP54P61011 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRP54P61011 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SRP54P61011 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC17.29■□□□□ 0.36
SRP54P61011 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
SRP54P61011 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.29■□□□□ 0.36
SRP54P61011 KLF4P1-201ENST00000412782 1185 ntBASIC17.29■□□□□ 0.36
SRP54P61011 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRP54P61011 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.29■□□□□ 0.36
SRP54P61011 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.29■□□□□ 0.36
SRP54P61011 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC17.29■□□□□ 0.36
SRP54P61011 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.29■□□□□ 0.36
SRP54P61011 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.29■□□□□ 0.36
SRP54P61011 SDCCAG3P1-201ENST00000589292 1150 ntBASIC17.29■□□□□ 0.36
SRP54P61011 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SRP54P61011 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.29■□□□□ 0.36
SRP54P61011 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC17.29■□□□□ 0.36
SRP54P61011 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SRP54P61011 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SRP54P61011 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.29■□□□□ 0.36
SRP54P61011 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.29■□□□□ 0.36
SRP54P61011 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SRP54P61011 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.29■□□□□ 0.36
SRP54P61011 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC17.29■□□□□ 0.36
SRP54P61011 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRP54P61011 AP002414.3-201ENST00000589352 1468 ntBASIC17.29■□□□□ 0.36
SRP54P61011 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRP54P61011 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.29■□□□□ 0.36
SRP54P61011 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.29■□□□□ 0.36
SRP54P61011 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SRP54P61011 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC17.29■□□□□ 0.36
SRP54P61011 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
SRP54P61011 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.29■□□□□ 0.36
SRP54P61011 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRP54P61011 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
SRP54P61011 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRP54P61011 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRP54P61011 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRP54P61011 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SRP54P61011 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRP54P61011 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SRP54P61011 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SRP54P61011 AC003669.1-201ENST00000334569 611 ntBASIC17.28■□□□□ 0.36
SRP54P61011 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.28■□□□□ 0.36
SRP54P61011 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRP54P61011 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
SRP54P61011 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.28■□□□□ 0.36
SRP54P61011 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SRP54P61011 IGHV3-52-201ENST00000519770 353 ntBASIC17.28■□□□□ 0.36
SRP54P61011 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SRP54P61011 AC145285.3-201ENST00000564603 959 ntBASIC17.28■□□□□ 0.36
SRP54P61011 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.28■□□□□ 0.36
SRP54P61011 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.28■□□□□ 0.36
SRP54P61011 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
SRP54P61011 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.28■□□□□ 0.36
SRP54P61011 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRP54P61011 AC023511.2-201ENST00000618803 211 ntBASIC17.28■□□□□ 0.36
SRP54P61011 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SRP54P61011 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRP54P61011 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SRP54P61011 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRP54P61011 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SRP54P61011 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SRP54P61011 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
SRP54P61011 AC104109.2-201ENST00000602919 1418 ntBASIC17.28■□□□□ 0.36
SRP54P61011 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SRP54P61011 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SRP54P61011 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.28■□□□□ 0.36
SRP54P61011 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SRP54P61011 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.27■□□□□ 0.36
SRP54P61011 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.27■□□□□ 0.36
SRP54P61011 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SRP54P61011 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SRP54P61011 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SRP54P61011 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
SRP54P61011 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SRP54P61011 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SRP54P61011 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SRP54P61011 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SRP54P61011 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SRP54P61011 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC17.27■□□□□ 0.36
SRP54P61011 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SRP54P61011 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.27■□□□□ 0.36
SRP54P61011 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SRP54P61011 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
SRP54P61011 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC17.27■□□□□ 0.36
SRP54P61011 MIR940-201ENST00000401276 94 ntBASIC17.27■□□□□ 0.36
SRP54P61011 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC17.27■□□□□ 0.36
SRP54P61011 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC17.27■□□□□ 0.36
SRP54P61011 RNA5SP415-201ENST00000517246 115 ntBASIC17.27■□□□□ 0.36
SRP54P61011 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.27■□□□□ 0.36
SRP54P61011 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms