Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 HLA-A-201ENST00000376802 1334 ntBASIC15.36■□□□□ 0.05
FOXG1P55316 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
FOXG1P55316 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC15.36■□□□□ 0.05
FOXG1P55316 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
FOXG1P55316 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
FOXG1P55316 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
FOXG1P55316 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.36■□□□□ 0.05
FOXG1P55316 AC009336.1-201ENST00000608941 1553 ntBASIC15.36■□□□□ 0.05
FOXG1P55316 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
FOXG1P55316 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
FOXG1P55316 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
FOXG1P55316 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
FOXG1P55316 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
FOXG1P55316 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
FOXG1P55316 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
FOXG1P55316 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC15.35■□□□□ 0.05
FOXG1P55316 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
FOXG1P55316 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.35■□□□□ 0.05
FOXG1P55316 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
FOXG1P55316 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
FOXG1P55316 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
FOXG1P55316 AC003669.1-201ENST00000334569 611 ntBASIC15.35■□□□□ 0.05
FOXG1P55316 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC15.35■□□□□ 0.05
FOXG1P55316 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
FOXG1P55316 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
FOXG1P55316 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC15.35■□□□□ 0.05
FOXG1P55316 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
FOXG1P55316 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
FOXG1P55316 AC073648.2-201ENST00000510116 352 ntBASIC15.35■□□□□ 0.05
FOXG1P55316 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.35■□□□□ 0.05
FOXG1P55316 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.35■□□□□ 0.05
FOXG1P55316 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.35■□□□□ 0.05
FOXG1P55316 CYGB-205ENST00000590175 830 ntTSL 3 BASIC15.35■□□□□ 0.05
FOXG1P55316 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
FOXG1P55316 AL139327.4-201ENST00000612362 153 ntBASIC15.35■□□□□ 0.05
FOXG1P55316 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
FOXG1P55316 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
FOXG1P55316 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.35■□□□□ 0.05
FOXG1P55316 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
FOXG1P55316 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
FOXG1P55316 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
FOXG1P55316 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
FOXG1P55316 PP12613-201ENST00000424958 2230 ntBASIC15.35■□□□□ 0.05
FOXG1P55316 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
FOXG1P55316 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
FOXG1P55316 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.35■□□□□ 0.05
FOXG1P55316 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
FOXG1P55316 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.34■□□□□ 0.05
FOXG1P55316 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
FOXG1P55316 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC15.34■□□□□ 0.05
FOXG1P55316 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
FOXG1P55316 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
FOXG1P55316 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC15.34■□□□□ 0.05
FOXG1P55316 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
FOXG1P55316 PCDHB18P-201ENST00000524813 2368 ntBASIC15.34■□□□□ 0.05
FOXG1P55316 LINC00896-202ENST00000609602 2128 ntBASIC15.34■□□□□ 0.05
FOXG1P55316 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
FOXG1P55316 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
FOXG1P55316 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC15.34■□□□□ 0.05
FOXG1P55316 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
FOXG1P55316 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
FOXG1P55316 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC15.34■□□□□ 0.05
FOXG1P55316 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
FOXG1P55316 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC15.34■□□□□ 0.05
FOXG1P55316 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
FOXG1P55316 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
FOXG1P55316 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
FOXG1P55316 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
FOXG1P55316 AL031284.1-201ENST00000419297 478 ntBASIC15.34■□□□□ 0.05
FOXG1P55316 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
FOXG1P55316 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
FOXG1P55316 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.34■□□□□ 0.05
FOXG1P55316 AC079776.4-201ENST00000511039 504 ntBASIC15.34■□□□□ 0.05
FOXG1P55316 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.34■□□□□ 0.05
FOXG1P55316 AC012640.2-201ENST00000561606 901 ntBASIC15.34■□□□□ 0.05
FOXG1P55316 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.34■□□□□ 0.05
FOXG1P55316 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.34■□□□□ 0.05
FOXG1P55316 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.34■□□□□ 0.05
FOXG1P55316 AC064862.7-201ENST00000604520 867 ntBASIC15.34■□□□□ 0.05
FOXG1P55316 MIR7706-201ENST00000613747 67 ntBASIC15.34■□□□□ 0.05
FOXG1P55316 AL022326.1-202ENST00000641533 845 ntBASIC15.34■□□□□ 0.05
FOXG1P55316 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
FOXG1P55316 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
FOXG1P55316 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.34■□□□□ 0.05
FOXG1P55316 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC15.34■□□□□ 0.05
FOXG1P55316 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC15.34■□□□□ 0.05
FOXG1P55316 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
FOXG1P55316 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC15.34■□□□□ 0.05
FOXG1P55316 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
FOXG1P55316 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
FOXG1P55316 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
FOXG1P55316 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
FOXG1P55316 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
FOXG1P55316 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
FOXG1P55316 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
FOXG1P55316 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
FOXG1P55316 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
FOXG1P55316 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
FOXG1P55316 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.33■□□□□ 0.05
FOXG1P55316 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms