Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 RNA5SP419-201ENST00000515908 135 ntBASIC17.9■□□□□ 0.46
CDH4P55283 PENK-208ENST00000523051 772 ntTSL 5 BASIC17.9■□□□□ 0.46
CDH4P55283 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.9■□□□□ 0.46
CDH4P55283 AP001005.1-201ENST00000571755 1248 ntBASIC17.9■□□□□ 0.46
CDH4P55283 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.9■□□□□ 0.46
CDH4P55283 AC107918.4-202ENST00000641623 219 ntBASIC17.9■□□□□ 0.46
CDH4P55283 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDH4P55283 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CDH4P55283 AC090340.1-201ENST00000620778 4980 ntBASIC17.9■□□□□ 0.46
CDH4P55283 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH4P55283 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH4P55283 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDH4P55283 HLA-A-201ENST00000376802 1334 ntBASIC17.9■□□□□ 0.46
CDH4P55283 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CDH4P55283 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH4P55283 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH4P55283 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
CDH4P55283 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
CDH4P55283 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CDH4P55283 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
CDH4P55283 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
CDH4P55283 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDH4P55283 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.89■□□□□ 0.45
CDH4P55283 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.89■□□□□ 0.45
CDH4P55283 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH4P55283 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH4P55283 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH4P55283 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH4P55283 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH4P55283 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH4P55283 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
CDH4P55283 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC17.89■□□□□ 0.45
CDH4P55283 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH4P55283 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC17.89■□□□□ 0.45
CDH4P55283 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.89■□□□□ 0.45
CDH4P55283 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC17.89■□□□□ 0.45
CDH4P55283 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDH4P55283 AL589182.2-201ENST00000619332 1049 ntBASIC17.89■□□□□ 0.45
CDH4P55283 FAM215A-202ENST00000632077 792 ntBASIC17.89■□□□□ 0.45
CDH4P55283 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH4P55283 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CDH4P55283 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH4P55283 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
CDH4P55283 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC17.89■□□□□ 0.45
CDH4P55283 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDH4P55283 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC17.89■□□□□ 0.45
CDH4P55283 GID4-202ENST00000376345 1391 ntTSL 3 BASIC17.89■□□□□ 0.45
CDH4P55283 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDH4P55283 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH4P55283 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDH4P55283 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH4P55283 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH4P55283 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDH4P55283 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC17.88■□□□□ 0.45
CDH4P55283 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.88■□□□□ 0.45
CDH4P55283 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH4P55283 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH4P55283 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH4P55283 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH4P55283 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.88■□□□□ 0.45
CDH4P55283 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH4P55283 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.88■□□□□ 0.45
CDH4P55283 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDH4P55283 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.88■□□□□ 0.45
CDH4P55283 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.88■□□□□ 0.45
CDH4P55283 AC093909.1-201ENST00000504731 1122 ntBASIC17.88■□□□□ 0.45
CDH4P55283 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CDH4P55283 AC139887.3-201ENST00000568585 713 ntBASIC17.88■□□□□ 0.45
CDH4P55283 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH4P55283 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC17.88■□□□□ 0.45
CDH4P55283 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDH4P55283 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC17.88■□□□□ 0.45
CDH4P55283 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDH4P55283 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH4P55283 AL133373.2-201ENST00000623187 2828 ntBASIC17.88■□□□□ 0.45
CDH4P55283 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH4P55283 NCF1C-201ENST00000438382 1427 ntBASIC17.88■□□□□ 0.45
CDH4P55283 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.88■□□□□ 0.45
CDH4P55283 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH4P55283 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.88■□□□□ 0.45
CDH4P55283 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CDH4P55283 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC17.88■□□□□ 0.45
CDH4P55283 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.88■□□□□ 0.45
CDH4P55283 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH4P55283 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDH4P55283 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.87■□□□□ 0.45
CDH4P55283 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CDH4P55283 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH4P55283 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.87■□□□□ 0.45
CDH4P55283 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH4P55283 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH4P55283 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH4P55283 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH4P55283 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH4P55283 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC17.87■□□□□ 0.45
CDH4P55283 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CDH4P55283 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.87■□□□□ 0.45
CDH4P55283 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.87■□□□□ 0.45
CDH4P55283 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.87■□□□□ 0.45
CDH4P55283 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC17.87■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms