Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PSMD4P55036 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PSMD4P55036 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PSMD4P55036 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PSMD4P55036 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
PSMD4P55036 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.35■□□□□ 0.21
PSMD4P55036 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
PSMD4P55036 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.35■□□□□ 0.21
PSMD4P55036 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.35■□□□□ 0.21
PSMD4P55036 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PSMD4P55036 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PSMD4P55036 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PSMD4P55036 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
PSMD4P55036 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.34■□□□□ 0.21
PSMD4P55036 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.34■□□□□ 0.21
PSMD4P55036 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
PSMD4P55036 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
PSMD4P55036 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PSMD4P55036 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PSMD4P55036 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PSMD4P55036 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.34■□□□□ 0.21
PSMD4P55036 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
PSMD4P55036 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PSMD4P55036 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PSMD4P55036 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
PSMD4P55036 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PSMD4P55036 FAM220CP-201ENST00000395253 831 ntBASIC16.34■□□□□ 0.21
PSMD4P55036 AL845331.1-201ENST00000424978 1190 ntBASIC16.34■□□□□ 0.21
PSMD4P55036 KRT17P6-201ENST00000453795 1220 ntBASIC16.34■□□□□ 0.21
PSMD4P55036 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PSMD4P55036 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.34■□□□□ 0.21
PSMD4P55036 AC012615.1-201ENST00000565797 1299 ntBASIC16.34■□□□□ 0.21
PSMD4P55036 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.34■□□□□ 0.21
PSMD4P55036 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PSMD4P55036 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.34■□□□□ 0.21
PSMD4P55036 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PSMD4P55036 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PSMD4P55036 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
PSMD4P55036 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PSMD4P55036 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PSMD4P55036 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
PSMD4P55036 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PSMD4P55036 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC16.34■□□□□ 0.21
PSMD4P55036 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.34■□□□□ 0.21
PSMD4P55036 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
PSMD4P55036 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PSMD4P55036 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.33■□□□□ 0.21
PSMD4P55036 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PSMD4P55036 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PSMD4P55036 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PSMD4P55036 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PSMD4P55036 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PSMD4P55036 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.33■□□□□ 0.2
PSMD4P55036 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PSMD4P55036 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PSMD4P55036 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.33■□□□□ 0.2
PSMD4P55036 AC005104.2-201ENST00000427818 678 ntBASIC16.33■□□□□ 0.2
PSMD4P55036 AC103564.2-201ENST00000432853 1299 ntBASIC16.33■□□□□ 0.2
PSMD4P55036 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.33■□□□□ 0.2
PSMD4P55036 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.33■□□□□ 0.2
PSMD4P55036 AC122714.2-201ENST00000502787 707 ntBASIC16.33■□□□□ 0.2
PSMD4P55036 AP000867.3-201ENST00000524675 377 ntBASIC16.33■□□□□ 0.2
PSMD4P55036 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PSMD4P55036 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
PSMD4P55036 AC005336.2-201ENST00000593183 939 ntBASIC16.33■□□□□ 0.2
PSMD4P55036 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
PSMD4P55036 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PSMD4P55036 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
PSMD4P55036 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.33■□□□□ 0.2
PSMD4P55036 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PSMD4P55036 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PSMD4P55036 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.33■□□□□ 0.2
PSMD4P55036 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.33■□□□□ 0.2
PSMD4P55036 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.33■□□□□ 0.2
PSMD4P55036 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PSMD4P55036 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.33■□□□□ 0.2
PSMD4P55036 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PSMD4P55036 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PSMD4P55036 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PSMD4P55036 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.33■□□□□ 0.2
PSMD4P55036 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PSMD4P55036 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PSMD4P55036 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
PSMD4P55036 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PSMD4P55036 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PSMD4P55036 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PSMD4P55036 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC16.32■□□□□ 0.2
PSMD4P55036 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PSMD4P55036 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PSMD4P55036 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PSMD4P55036 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PSMD4P55036 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
PSMD4P55036 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.32■□□□□ 0.2
PSMD4P55036 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PSMD4P55036 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.32■□□□□ 0.2
PSMD4P55036 POM121L3P-201ENST00000419331 1163 ntBASIC16.32■□□□□ 0.2
PSMD4P55036 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PSMD4P55036 AC007967.3-201ENST00000434308 558 ntBASIC16.32■□□□□ 0.2
PSMD4P55036 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.32■□□□□ 0.2
PSMD4P55036 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms