Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
LIMK2P53671 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.69■□□□□ 0.42
LIMK2P53671 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
LIMK2P53671 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.69■□□□□ 0.42
LIMK2P53671 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LIMK2P53671 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LIMK2P53671 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LIMK2P53671 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
LIMK2P53671 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
LIMK2P53671 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.68■□□□□ 0.42
LIMK2P53671 BX276092.7-203ENST00000637198 1536 ntBASIC17.68■□□□□ 0.42
LIMK2P53671 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.68■□□□□ 0.42
LIMK2P53671 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
LIMK2P53671 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LIMK2P53671 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LIMK2P53671 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.68■□□□□ 0.42
LIMK2P53671 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.68■□□□□ 0.42
LIMK2P53671 AC112698.1-201ENST00000510299 916 ntBASIC17.68■□□□□ 0.42
LIMK2P53671 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.68■□□□□ 0.42
LIMK2P53671 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC17.68■□□□□ 0.42
LIMK2P53671 AL121772.3-201ENST00000610840 674 ntBASIC17.68■□□□□ 0.42
LIMK2P53671 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LIMK2P53671 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LIMK2P53671 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.68■□□□□ 0.42
LIMK2P53671 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.68■□□□□ 0.42
LIMK2P53671 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
LIMK2P53671 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LIMK2P53671 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LIMK2P53671 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.68■□□□□ 0.42
LIMK2P53671 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
LIMK2P53671 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LIMK2P53671 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
LIMK2P53671 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LIMK2P53671 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
LIMK2P53671 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LIMK2P53671 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.67■□□□□ 0.42
LIMK2P53671 AC099398.1-201ENST00000567919 2776 ntBASIC17.67■□□□□ 0.42
LIMK2P53671 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LIMK2P53671 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LIMK2P53671 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LIMK2P53671 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LIMK2P53671 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC17.67■□□□□ 0.42
LIMK2P53671 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LIMK2P53671 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.67■□□□□ 0.42
LIMK2P53671 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.67■□□□□ 0.42
LIMK2P53671 AC005104.2-201ENST00000427818 678 ntBASIC17.67■□□□□ 0.42
LIMK2P53671 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.67■□□□□ 0.42
LIMK2P53671 AC104819.1-201ENST00000504587 486 ntBASIC17.67■□□□□ 0.42
LIMK2P53671 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.67■□□□□ 0.42
LIMK2P53671 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC17.67■□□□□ 0.42
LIMK2P53671 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LIMK2P53671 IFNL4P1-201ENST00000607083 540 ntBASIC17.67■□□□□ 0.42
LIMK2P53671 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LIMK2P53671 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
LIMK2P53671 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LIMK2P53671 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LIMK2P53671 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LIMK2P53671 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LIMK2P53671 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
LIMK2P53671 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
LIMK2P53671 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
LIMK2P53671 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
LIMK2P53671 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
LIMK2P53671 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.67■□□□□ 0.42
LIMK2P53671 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LIMK2P53671 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LIMK2P53671 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LIMK2P53671 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.66■□□□□ 0.42
LIMK2P53671 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC17.66■□□□□ 0.42
LIMK2P53671 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LIMK2P53671 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
LIMK2P53671 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
LIMK2P53671 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LIMK2P53671 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
LIMK2P53671 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LIMK2P53671 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.66■□□□□ 0.42
LIMK2P53671 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LIMK2P53671 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LIMK2P53671 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
LIMK2P53671 AC246785.2-201ENST00000432512 513 ntBASIC17.66■□□□□ 0.42
LIMK2P53671 GUSBP12-201ENST00000513727 720 ntBASIC17.66■□□□□ 0.42
LIMK2P53671 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.66■□□□□ 0.42
LIMK2P53671 AC091304.2-201ENST00000564639 760 ntBASIC17.66■□□□□ 0.42
LIMK2P53671 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.66■□□□□ 0.42
LIMK2P53671 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.66■□□□□ 0.42
LIMK2P53671 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LIMK2P53671 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
LIMK2P53671 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.66■□□□□ 0.42
LIMK2P53671 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LIMK2P53671 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LIMK2P53671 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
LIMK2P53671 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.66■□□□□ 0.42
LIMK2P53671 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LIMK2P53671 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LIMK2P53671 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LIMK2P53671 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LIMK2P53671 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LIMK2P53671 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LIMK2P53671 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
LIMK2P53671 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms