Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BRCA2P51587 AC022144.1-201ENST00000602255 1580 ntBASIC19.41■□□□□ 0.7
BRCA2P51587 AC004945.1-201ENST00000416738 983 ntBASIC19.41■□□□□ 0.7
BRCA2P51587 FALEC-201ENST00000416894 566 ntTSL 3 BASIC19.41■□□□□ 0.7
BRCA2P51587 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC19.41■□□□□ 0.7
BRCA2P51587 SPCS2P4-201ENST00000436160 681 ntBASIC19.41■□□□□ 0.7
BRCA2P51587 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC19.41■□□□□ 0.7
BRCA2P51587 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC19.41■□□□□ 0.7
BRCA2P51587 AC026120.1-201ENST00000611536 926 ntBASIC19.41■□□□□ 0.7
BRCA2P51587 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.41■□□□□ 0.7
BRCA2P51587 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC19.41■□□□□ 0.7
BRCA2P51587 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BRCA2P51587 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
BRCA2P51587 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
BRCA2P51587 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
BRCA2P51587 AC069120.2-201ENST00000524091 540 ntBASIC19.41■□□□□ 0.7
BRCA2P51587 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC19.41■□□□□ 0.7
BRCA2P51587 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC19.41■□□□□ 0.7
BRCA2P51587 GGTLC5P-201ENST00000617623 998 ntBASIC19.41■□□□□ 0.7
BRCA2P51587 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BRCA2P51587 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BRCA2P51587 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BRCA2P51587 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
BRCA2P51587 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
BRCA2P51587 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BRCA2P51587 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
BRCA2P51587 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.4■□□□□ 0.7
BRCA2P51587 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
BRCA2P51587 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC19.4■□□□□ 0.7
BRCA2P51587 LINC01225-203ENST00000563550 1244 ntBASIC19.4■□□□□ 0.7
BRCA2P51587 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
BRCA2P51587 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.4■□□□□ 0.7
BRCA2P51587 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
BRCA2P51587 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
BRCA2P51587 CD81-202ENST00000381036 880 ntTSL 3 BASIC19.4■□□□□ 0.7
BRCA2P51587 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC19.4■□□□□ 0.7
BRCA2P51587 SLC25A6P5-201ENST00000435663 894 ntBASIC19.4■□□□□ 0.7
BRCA2P51587 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
BRCA2P51587 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
BRCA2P51587 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC19.4■□□□□ 0.7
BRCA2P51587 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.4■□□□□ 0.7
BRCA2P51587 FAM185BP-201ENST00000443595 716 ntBASIC19.39■□□□□ 0.7
BRCA2P51587 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC19.39■□□□□ 0.7
BRCA2P51587 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
BRCA2P51587 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC19.39■□□□□ 0.7
BRCA2P51587 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
BRCA2P51587 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
BRCA2P51587 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC19.39■□□□□ 0.7
BRCA2P51587 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
BRCA2P51587 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.39■□□□□ 0.7
BRCA2P51587 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
BRCA2P51587 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BRCA2P51587 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
BRCA2P51587 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
BRCA2P51587 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC19.39■□□□□ 0.69
BRCA2P51587 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC19.39■□□□□ 0.69
BRCA2P51587 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC19.39■□□□□ 0.69
BRCA2P51587 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
BRCA2P51587 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BRCA2P51587 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.39■□□□□ 0.69
BRCA2P51587 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BRCA2P51587 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC19.39■□□□□ 0.69
BRCA2P51587 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC19.39■□□□□ 0.69
BRCA2P51587 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BRCA2P51587 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.39■□□□□ 0.69
BRCA2P51587 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
BRCA2P51587 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BRCA2P51587 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
BRCA2P51587 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
BRCA2P51587 AC100757.3-201ENST00000622361 1406 ntBASIC19.39■□□□□ 0.69
BRCA2P51587 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BRCA2P51587 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
BRCA2P51587 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BRCA2P51587 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC19.38■□□□□ 0.69
BRCA2P51587 AC002056.1-201ENST00000395613 760 ntBASIC19.38■□□□□ 0.69
BRCA2P51587 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
BRCA2P51587 AC009118.2-201ENST00000613275 655 ntBASIC19.38■□□□□ 0.69
BRCA2P51587 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.38■□□□□ 0.69
BRCA2P51587 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BRCA2P51587 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC19.38■□□□□ 0.69
BRCA2P51587 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
BRCA2P51587 TSSK5P-201ENST00000423978 907 ntBASIC19.38■□□□□ 0.69
BRCA2P51587 AC103564.2-201ENST00000432853 1299 ntBASIC19.38■□□□□ 0.69
BRCA2P51587 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC19.38■□□□□ 0.69
BRCA2P51587 GATD1-206ENST00000526325 756 ntTSL 5 BASIC19.38■□□□□ 0.69
BRCA2P51587 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BRCA2P51587 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BRCA2P51587 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
BRCA2P51587 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
BRCA2P51587 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
BRCA2P51587 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.38■□□□□ 0.69
BRCA2P51587 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
BRCA2P51587 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.38■□□□□ 0.69
BRCA2P51587 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.38■□□□□ 0.69
BRCA2P51587 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC19.38■□□□□ 0.69
BRCA2P51587 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.38■□□□□ 0.69
BRCA2P51587 GIMAP3P-201ENST00000495150 836 ntBASIC19.38■□□□□ 0.69
BRCA2P51587 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
BRCA2P51587 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC19.38■□□□□ 0.69
BRCA2P51587 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms