Protein–RNA interactions for Protein: P51157

RAB28, Ras-related protein Rab-28, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28P51157 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RAB28P51157 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
RAB28P51157 LYSMD4-203ENST00000378904 2122 ntBASIC16.92■□□□□ 0.3
RAB28P51157 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.92■□□□□ 0.3
RAB28P51157 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC16.92■□□□□ 0.3
RAB28P51157 SIGLEC30P-201ENST00000455569 941 ntBASIC16.92■□□□□ 0.3
RAB28P51157 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB28P51157 SART3-203ENST00000546611 1184 ntBASIC16.92■□□□□ 0.3
RAB28P51157 AL160237.2-201ENST00000556165 472 ntBASIC16.92■□□□□ 0.3
RAB28P51157 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.92■□□□□ 0.3
RAB28P51157 CALM3-211ENST00000598871 561 ntTSL 4 BASIC16.92■□□□□ 0.3
RAB28P51157 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB28P51157 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.92■□□□□ 0.3
RAB28P51157 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.92■□□□□ 0.3
RAB28P51157 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB28P51157 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.92■□□□□ 0.3
RAB28P51157 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
RAB28P51157 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB28P51157 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RAB28P51157 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB28P51157 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
RAB28P51157 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
RAB28P51157 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB28P51157 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.91■□□□□ 0.3
RAB28P51157 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB28P51157 AC046185.3-201ENST00000623228 1824 ntBASIC16.91■□□□□ 0.3
RAB28P51157 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.91■□□□□ 0.3
RAB28P51157 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB28P51157 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.91■□□□□ 0.3
RAB28P51157 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.91■□□□□ 0.3
RAB28P51157 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB28P51157 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
RAB28P51157 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RAB28P51157 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB28P51157 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC16.91■□□□□ 0.3
RAB28P51157 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB28P51157 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RAB28P51157 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.91■□□□□ 0.3
RAB28P51157 PRYP5-201ENST00000451909 266 ntBASIC16.91■□□□□ 0.3
RAB28P51157 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RAB28P51157 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.91■□□□□ 0.3
RAB28P51157 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RAB28P51157 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.91■□□□□ 0.3
RAB28P51157 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.91■□□□□ 0.3
RAB28P51157 TK1-204ENST00000590430 683 ntTSL 3 BASIC16.91■□□□□ 0.3
RAB28P51157 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RAB28P51157 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB28P51157 AC104692.2-201ENST00000603054 253 ntBASIC16.91■□□□□ 0.3
RAB28P51157 TP73-AS1-207ENST00000624167 988 ntBASIC16.91■□□□□ 0.3
RAB28P51157 AL022326.1-202ENST00000641533 845 ntBASIC16.91■□□□□ 0.3
RAB28P51157 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC16.91■□□□□ 0.3
RAB28P51157 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB28P51157 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB28P51157 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB28P51157 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.91■□□□□ 0.3
RAB28P51157 AC148477.5-201ENST00000625164 1645 ntBASIC16.91■□□□□ 0.3
RAB28P51157 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB28P51157 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RAB28P51157 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RAB28P51157 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB28P51157 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB28P51157 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RAB28P51157 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RAB28P51157 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RAB28P51157 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
RAB28P51157 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB28P51157 AL138688.1-201ENST00000624851 1594 ntBASIC16.9■□□□□ 0.3
RAB28P51157 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC16.9■□□□□ 0.3
RAB28P51157 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.9■□□□□ 0.3
RAB28P51157 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB28P51157 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB28P51157 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
RAB28P51157 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.9■□□□□ 0.3
RAB28P51157 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RAB28P51157 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RAB28P51157 AC026396.1-201ENST00000419388 421 ntBASIC16.9■□□□□ 0.3
RAB28P51157 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.9■□□□□ 0.3
RAB28P51157 BX005266.1-201ENST00000473402 457 ntBASIC16.9■□□□□ 0.3
RAB28P51157 AC073648.2-201ENST00000510116 352 ntBASIC16.9■□□□□ 0.3
RAB28P51157 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
RAB28P51157 AP002469.2-201ENST00000531724 424 ntBASIC16.9■□□□□ 0.3
RAB28P51157 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RAB28P51157 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
RAB28P51157 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB28P51157 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB28P51157 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB28P51157 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB28P51157 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
RAB28P51157 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB28P51157 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB28P51157 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.9■□□□□ 0.3
RAB28P51157 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.9■□□□□ 0.3
RAB28P51157 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.9■□□□□ 0.3
RAB28P51157 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
RAB28P51157 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RAB28P51157 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
RAB28P51157 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.3
RAB28P51157 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB28P51157 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RAB28P51157 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms