Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CENPFP49454 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.59■□□□□ 0.73
CENPFP49454 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC19.59■□□□□ 0.73
CENPFP49454 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CENPFP49454 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC19.59■□□□□ 0.73
CENPFP49454 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC19.59■□□□□ 0.73
CENPFP49454 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.59■□□□□ 0.73
CENPFP49454 GGTLC5P-201ENST00000617623 998 ntBASIC19.59■□□□□ 0.73
CENPFP49454 AL358472.5-202ENST00000641448 1267 ntBASIC19.59■□□□□ 0.73
CENPFP49454 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CENPFP49454 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CENPFP49454 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC19.58■□□□□ 0.73
CENPFP49454 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CENPFP49454 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC19.58■□□□□ 0.73
CENPFP49454 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CENPFP49454 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CENPFP49454 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
CENPFP49454 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
CENPFP49454 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC19.58■□□□□ 0.73
CENPFP49454 SPDYE14P-201ENST00000442619 822 ntBASIC19.58■□□□□ 0.73
CENPFP49454 TMPRSS11CP-201ENST00000453277 683 ntBASIC19.58■□□□□ 0.73
CENPFP49454 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC19.58■□□□□ 0.73
CENPFP49454 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.58■□□□□ 0.73
CENPFP49454 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.58■□□□□ 0.73
CENPFP49454 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
CENPFP49454 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC19.58■□□□□ 0.73
CENPFP49454 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.58■□□□□ 0.72
CENPFP49454 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC19.58■□□□□ 0.72
CENPFP49454 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.58■□□□□ 0.72
CENPFP49454 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC19.58■□□□□ 0.72
CENPFP49454 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC19.58■□□□□ 0.72
CENPFP49454 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC19.58■□□□□ 0.72
CENPFP49454 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC19.58■□□□□ 0.72
CENPFP49454 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
CENPFP49454 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CENPFP49454 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CENPFP49454 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CENPFP49454 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC19.57■□□□□ 0.72
CENPFP49454 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CENPFP49454 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.57■□□□□ 0.72
CENPFP49454 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.57■□□□□ 0.72
CENPFP49454 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CENPFP49454 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CENPFP49454 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
CENPFP49454 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CENPFP49454 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CENPFP49454 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.57■□□□□ 0.72
CENPFP49454 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CENPFP49454 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC19.57■□□□□ 0.72
CENPFP49454 RN7SL589P-201ENST00000481268 310 ntBASIC19.57■□□□□ 0.72
CENPFP49454 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC19.57■□□□□ 0.72
CENPFP49454 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC19.57■□□□□ 0.72
CENPFP49454 AC112191.1-201ENST00000523689 701 ntBASIC19.57■□□□□ 0.72
CENPFP49454 NOP2-211ENST00000540228 668 ntTSL 2 BASIC19.57■□□□□ 0.72
CENPFP49454 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC19.57■□□□□ 0.72
CENPFP49454 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CENPFP49454 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.57■□□□□ 0.72
CENPFP49454 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.57■□□□□ 0.72
CENPFP49454 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC19.57■□□□□ 0.72
CENPFP49454 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.57■□□□□ 0.72
CENPFP49454 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CENPFP49454 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
CENPFP49454 FAM185BP-201ENST00000443595 716 ntBASIC19.57■□□□□ 0.72
CENPFP49454 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
CENPFP49454 SSH2-211ENST00000590153 570 ntTSL 4 BASIC19.57■□□□□ 0.72
CENPFP49454 AL158211.3-201ENST00000607385 239 ntBASIC19.57■□□□□ 0.72
CENPFP49454 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
CENPFP49454 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CENPFP49454 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC19.57■□□□□ 0.72
CENPFP49454 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CENPFP49454 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CENPFP49454 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CENPFP49454 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC19.56■□□□□ 0.72
CENPFP49454 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CENPFP49454 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC19.56■□□□□ 0.72
CENPFP49454 MIR6805-201ENST00000615055 62 ntBASIC19.56■□□□□ 0.72
CENPFP49454 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CENPFP49454 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.56■□□□□ 0.72
CENPFP49454 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.56■□□□□ 0.72
CENPFP49454 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CENPFP49454 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CENPFP49454 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CENPFP49454 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
CENPFP49454 CXCL1P1-201ENST00000502804 216 ntBASIC19.56■□□□□ 0.72
CENPFP49454 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC19.56■□□□□ 0.72
CENPFP49454 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
CENPFP49454 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CENPFP49454 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
CENPFP49454 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CENPFP49454 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CENPFP49454 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CENPFP49454 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC19.55■□□□□ 0.72
CENPFP49454 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CENPFP49454 AC007064.4-201ENST00000637740 555 ntBASIC19.55■□□□□ 0.72
CENPFP49454 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC19.55■□□□□ 0.72
CENPFP49454 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.55■□□□□ 0.72
CENPFP49454 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CENPFP49454 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC19.55■□□□□ 0.72
CENPFP49454 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CENPFP49454 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms