Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC6A12P48065 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC6A12P48065 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SLC6A12P48065 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.89■□□□□ 0.3
SLC6A12P48065 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.89■□□□□ 0.3
SLC6A12P48065 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SLC6A12P48065 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SLC6A12P48065 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SLC6A12P48065 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SLC6A12P48065 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC6A12P48065 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC6A12P48065 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC6A12P48065 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC16.89■□□□□ 0.29
SLC6A12P48065 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SLC6A12P48065 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC6A12P48065 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.89■□□□□ 0.29
SLC6A12P48065 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC6A12P48065 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.89■□□□□ 0.29
SLC6A12P48065 AC012313.1-201ENST00000593393 3059 ntBASIC16.89■□□□□ 0.29
SLC6A12P48065 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC16.89■□□□□ 0.29
SLC6A12P48065 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC6A12P48065 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.89■□□□□ 0.29
SLC6A12P48065 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC6A12P48065 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC6A12P48065 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC6A12P48065 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SLC6A12P48065 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
SLC6A12P48065 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC6A12P48065 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC16.89■□□□□ 0.29
SLC6A12P48065 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.89■□□□□ 0.29
SLC6A12P48065 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC6A12P48065 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.89■□□□□ 0.29
SLC6A12P48065 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.89■□□□□ 0.29
SLC6A12P48065 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC6A12P48065 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC16.89■□□□□ 0.29
SLC6A12P48065 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.89■□□□□ 0.29
SLC6A12P48065 AP000867.4-201ENST00000641616 219 ntBASIC16.89■□□□□ 0.29
SLC6A12P48065 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SLC6A12P48065 AC093525.9-201ENST00000624961 1746 ntBASIC16.89■□□□□ 0.29
SLC6A12P48065 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
SLC6A12P48065 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.89■□□□□ 0.29
SLC6A12P48065 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.89■□□□□ 0.29
SLC6A12P48065 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.89■□□□□ 0.29
SLC6A12P48065 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SLC6A12P48065 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SLC6A12P48065 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SLC6A12P48065 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
SLC6A12P48065 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC6A12P48065 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLC6A12P48065 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC6A12P48065 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC6A12P48065 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.88■□□□□ 0.29
SLC6A12P48065 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SLC6A12P48065 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.88■□□□□ 0.29
SLC6A12P48065 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SLC6A12P48065 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SLC6A12P48065 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
SLC6A12P48065 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC6A12P48065 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC6A12P48065 KLF4P1-201ENST00000412782 1185 ntBASIC16.88■□□□□ 0.29
SLC6A12P48065 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
SLC6A12P48065 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC16.88■□□□□ 0.29
SLC6A12P48065 UPK3BP1-201ENST00000428678 509 ntBASIC16.88■□□□□ 0.29
SLC6A12P48065 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.88■□□□□ 0.29
SLC6A12P48065 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.88■□□□□ 0.29
SLC6A12P48065 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.88■□□□□ 0.29
SLC6A12P48065 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.88■□□□□ 0.29
SLC6A12P48065 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC16.88■□□□□ 0.29
SLC6A12P48065 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLC6A12P48065 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.88■□□□□ 0.29
SLC6A12P48065 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLC6A12P48065 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC6A12P48065 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC6A12P48065 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
SLC6A12P48065 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC6A12P48065 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC6A12P48065 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC6A12P48065 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SLC6A12P48065 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC6A12P48065 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC6A12P48065 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SLC6A12P48065 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC6A12P48065 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SLC6A12P48065 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SLC6A12P48065 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
SLC6A12P48065 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.87■□□□□ 0.29
SLC6A12P48065 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.87■□□□□ 0.29
SLC6A12P48065 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLC6A12P48065 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC6A12P48065 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLC6A12P48065 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
SLC6A12P48065 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC6A12P48065 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC6A12P48065 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC6A12P48065 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
SLC6A12P48065 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLC6A12P48065 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SLC6A12P48065 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
SLC6A12P48065 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
SLC6A12P48065 FUOM-202ENST00000368551 628 ntTSL 3 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms