Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HADHAP40939 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.75■□□□□ 0.43
HADHAP40939 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
HADHAP40939 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
HADHAP40939 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
HADHAP40939 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HADHAP40939 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.75■□□□□ 0.43
HADHAP40939 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.75■□□□□ 0.43
HADHAP40939 DRAXINP1-201ENST00000437611 948 ntBASIC17.75■□□□□ 0.43
HADHAP40939 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HADHAP40939 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.75■□□□□ 0.43
HADHAP40939 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HADHAP40939 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
HADHAP40939 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.75■□□□□ 0.43
HADHAP40939 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
HADHAP40939 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HADHAP40939 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HADHAP40939 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
HADHAP40939 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HADHAP40939 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.75■□□□□ 0.43
HADHAP40939 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC17.75■□□□□ 0.43
HADHAP40939 AL121761.2-201ENST00000598007 1648 ntBASIC17.75■□□□□ 0.43
HADHAP40939 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HADHAP40939 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HADHAP40939 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HADHAP40939 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
HADHAP40939 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HADHAP40939 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HADHAP40939 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HADHAP40939 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HADHAP40939 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HADHAP40939 AP001094.4-201ENST00000579008 2176 ntBASIC17.74■□□□□ 0.43
HADHAP40939 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HADHAP40939 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
HADHAP40939 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.74■□□□□ 0.43
HADHAP40939 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HADHAP40939 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
HADHAP40939 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
HADHAP40939 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.74■□□□□ 0.43
HADHAP40939 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HADHAP40939 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HADHAP40939 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HADHAP40939 UPK3BP1-201ENST00000428678 509 ntBASIC17.74■□□□□ 0.43
HADHAP40939 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.74■□□□□ 0.43
HADHAP40939 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HADHAP40939 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HADHAP40939 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HADHAP40939 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HADHAP40939 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.74■□□□□ 0.43
HADHAP40939 CROCCP2-202ENST00000412962 2773 ntBASIC17.74■□□□□ 0.43
HADHAP40939 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HADHAP40939 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HADHAP40939 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HADHAP40939 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HADHAP40939 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HADHAP40939 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HADHAP40939 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
HADHAP40939 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HADHAP40939 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
HADHAP40939 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
HADHAP40939 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.73■□□□□ 0.43
HADHAP40939 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
HADHAP40939 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HADHAP40939 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
HADHAP40939 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HADHAP40939 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
HADHAP40939 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
HADHAP40939 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HADHAP40939 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HADHAP40939 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
HADHAP40939 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.73■□□□□ 0.43
HADHAP40939 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HADHAP40939 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.73■□□□□ 0.43
HADHAP40939 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HADHAP40939 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HADHAP40939 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
HADHAP40939 AL845331.1-201ENST00000424978 1190 ntBASIC17.73■□□□□ 0.43
HADHAP40939 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HADHAP40939 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.73■□□□□ 0.43
HADHAP40939 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
HADHAP40939 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC17.73■□□□□ 0.43
HADHAP40939 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.73■□□□□ 0.43
HADHAP40939 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.73■□□□□ 0.43
HADHAP40939 Z69720.1-201ENST00000601483 472 ntBASIC17.73■□□□□ 0.43
HADHAP40939 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HADHAP40939 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
HADHAP40939 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC17.73■□□□□ 0.43
HADHAP40939 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
HADHAP40939 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC17.73■□□□□ 0.43
HADHAP40939 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.73■□□□□ 0.43
HADHAP40939 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HADHAP40939 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
HADHAP40939 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.73■□□□□ 0.43
HADHAP40939 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.73■□□□□ 0.43
HADHAP40939 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HADHAP40939 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC17.73■□□□□ 0.43
HADHAP40939 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
HADHAP40939 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
HADHAP40939 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
HADHAP40939 AC125634.1-201ENST00000438758 1403 ntBASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms