Protein–RNA interactions for Protein: P32239

CCKBR, Gastrin/cholecystokinin type B receptor, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCKBRP32239 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCKBRP32239 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCKBRP32239 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.83■□□□□ 0.28
CCKBRP32239 AC002310.6-201ENST00000624451 1377 ntBASIC16.83■□□□□ 0.28
CCKBRP32239 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16.83■□□□□ 0.28
CCKBRP32239 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.83■□□□□ 0.28
CCKBRP32239 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CCKBRP32239 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CCKBRP32239 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CCKBRP32239 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
CCKBRP32239 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.82■□□□□ 0.28
CCKBRP32239 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC16.82■□□□□ 0.28
CCKBRP32239 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCKBRP32239 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCKBRP32239 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCKBRP32239 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CCKBRP32239 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCKBRP32239 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC16.82■□□□□ 0.28
CCKBRP32239 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
CCKBRP32239 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCKBRP32239 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCKBRP32239 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.82■□□□□ 0.28
CCKBRP32239 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCKBRP32239 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCKBRP32239 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCKBRP32239 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCKBRP32239 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCKBRP32239 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CCKBRP32239 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.82■□□□□ 0.28
CCKBRP32239 AP006288.1-201ENST00000446065 395 ntBASIC16.82■□□□□ 0.28
CCKBRP32239 SIGLEC30P-201ENST00000455569 941 ntBASIC16.82■□□□□ 0.28
CCKBRP32239 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC16.82■□□□□ 0.28
CCKBRP32239 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCKBRP32239 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.82■□□□□ 0.28
CCKBRP32239 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.82■□□□□ 0.28
CCKBRP32239 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.82■□□□□ 0.28
CCKBRP32239 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCKBRP32239 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCKBRP32239 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCKBRP32239 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCKBRP32239 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
CCKBRP32239 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCKBRP32239 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CCKBRP32239 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CCKBRP32239 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CCKBRP32239 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCKBRP32239 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.81■□□□□ 0.28
CCKBRP32239 AC009113.1-201ENST00000570267 2443 ntBASIC16.81■□□□□ 0.28
CCKBRP32239 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.81■□□□□ 0.28
CCKBRP32239 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CCKBRP32239 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CCKBRP32239 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CCKBRP32239 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.81■□□□□ 0.28
CCKBRP32239 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCKBRP32239 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.81■□□□□ 0.28
CCKBRP32239 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.81■□□□□ 0.28
CCKBRP32239 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCKBRP32239 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCKBRP32239 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCKBRP32239 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC16.81■□□□□ 0.28
CCKBRP32239 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CCKBRP32239 CRYGEP-201ENST00000412192 528 ntBASIC16.81■□□□□ 0.28
CCKBRP32239 AC211486.1-202ENST00000416371 468 ntBASIC16.81■□□□□ 0.28
CCKBRP32239 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
CCKBRP32239 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.81■□□□□ 0.28
CCKBRP32239 KRT18P2-201ENST00000447938 1258 ntBASIC16.81■□□□□ 0.28
CCKBRP32239 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC16.81■□□□□ 0.28
CCKBRP32239 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.81■□□□□ 0.28
CCKBRP32239 AC211476.1-201ENST00000503899 468 ntBASIC16.81■□□□□ 0.28
CCKBRP32239 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC16.81■□□□□ 0.28
CCKBRP32239 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCKBRP32239 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCKBRP32239 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.81■□□□□ 0.28
CCKBRP32239 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.81■□□□□ 0.28
CCKBRP32239 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CCKBRP32239 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCKBRP32239 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.81■□□□□ 0.28
CCKBRP32239 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC16.81■□□□□ 0.28
CCKBRP32239 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CCKBRP32239 AC006504.4-201ENST00000592118 1568 ntBASIC16.81■□□□□ 0.28
CCKBRP32239 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CCKBRP32239 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.8■□□□□ 0.28
CCKBRP32239 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCKBRP32239 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCKBRP32239 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCKBRP32239 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCKBRP32239 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCKBRP32239 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCKBRP32239 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CCKBRP32239 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
CCKBRP32239 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCKBRP32239 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.8■□□□□ 0.28
CCKBRP32239 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCKBRP32239 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCKBRP32239 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CCKBRP32239 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.8■□□□□ 0.28
CCKBRP32239 PRSS29P-201ENST00000440800 595 ntBASIC16.8■□□□□ 0.28
CCKBRP32239 DNAJB3-202ENST00000449667 1266 ntBASIC16.8■□□□□ 0.28
CCKBRP32239 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.8■□□□□ 0.28
CCKBRP32239 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms