Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 AL135744.1-201ENST00000565098 629 ntBASIC17.17■□□□□ 0.34
HOXA6P31267 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.17■□□□□ 0.34
HOXA6P31267 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.17■□□□□ 0.34
HOXA6P31267 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
HOXA6P31267 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
HOXA6P31267 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HOXA6P31267 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.17■□□□□ 0.34
HOXA6P31267 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
HOXA6P31267 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
HOXA6P31267 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.16■□□□□ 0.34
HOXA6P31267 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HOXA6P31267 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HOXA6P31267 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.16■□□□□ 0.34
HOXA6P31267 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HOXA6P31267 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HOXA6P31267 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
HOXA6P31267 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.16■□□□□ 0.34
HOXA6P31267 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HOXA6P31267 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
HOXA6P31267 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
HOXA6P31267 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.16■□□□□ 0.34
HOXA6P31267 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HOXA6P31267 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HOXA6P31267 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.16■□□□□ 0.34
HOXA6P31267 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HOXA6P31267 BAD-202ENST00000394531 631 ntTSL 3 BASIC17.16■□□□□ 0.34
HOXA6P31267 SPDYE7P-202ENST00000420373 878 ntBASIC17.16■□□□□ 0.34
HOXA6P31267 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HOXA6P31267 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HOXA6P31267 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HOXA6P31267 BAD-207ENST00000544785 525 ntTSL 3 BASIC17.16■□□□□ 0.34
HOXA6P31267 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.16■□□□□ 0.34
HOXA6P31267 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HOXA6P31267 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.16■□□□□ 0.34
HOXA6P31267 AC008761.3-201ENST00000624803 892 ntBASIC17.16■□□□□ 0.34
HOXA6P31267 HFE2-206ENST00000634927 506 ntTSL 4 BASIC17.16■□□□□ 0.34
HOXA6P31267 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC17.16■□□□□ 0.34
HOXA6P31267 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
HOXA6P31267 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HOXA6P31267 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.16■□□□□ 0.34
HOXA6P31267 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HOXA6P31267 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HOXA6P31267 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
HOXA6P31267 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HOXA6P31267 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.16■□□□□ 0.34
HOXA6P31267 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HOXA6P31267 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.16■□□□□ 0.34
HOXA6P31267 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HOXA6P31267 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
HOXA6P31267 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HOXA6P31267 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HOXA6P31267 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
HOXA6P31267 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HOXA6P31267 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
HOXA6P31267 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.15■□□□□ 0.34
HOXA6P31267 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
HOXA6P31267 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HOXA6P31267 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HOXA6P31267 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HOXA6P31267 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HOXA6P31267 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.15■□□□□ 0.34
HOXA6P31267 AC125807.1-201ENST00000483097 614 ntBASIC17.15■□□□□ 0.34
HOXA6P31267 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.15■□□□□ 0.34
HOXA6P31267 AC107918.2-201ENST00000530817 355 ntBASIC17.15■□□□□ 0.34
HOXA6P31267 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HOXA6P31267 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC17.15■□□□□ 0.34
HOXA6P31267 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HOXA6P31267 AL158211.3-201ENST00000607385 239 ntBASIC17.15■□□□□ 0.34
HOXA6P31267 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HOXA6P31267 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HOXA6P31267 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.15■□□□□ 0.34
HOXA6P31267 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.15■□□□□ 0.34
HOXA6P31267 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17.15■□□□□ 0.34
HOXA6P31267 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.15■□□□□ 0.34
HOXA6P31267 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
HOXA6P31267 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.15■□□□□ 0.34
HOXA6P31267 AC046185.3-201ENST00000623228 1824 ntBASIC17.14■□□□□ 0.34
HOXA6P31267 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.34
HOXA6P31267 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HOXA6P31267 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HOXA6P31267 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HOXA6P31267 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HOXA6P31267 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.14■□□□□ 0.33
HOXA6P31267 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
HOXA6P31267 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HOXA6P31267 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HOXA6P31267 SPCS2P4-201ENST00000436160 681 ntBASIC17.14■□□□□ 0.33
HOXA6P31267 RBPMS2P1-201ENST00000437762 623 ntBASIC17.14■□□□□ 0.33
HOXA6P31267 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC17.14■□□□□ 0.33
HOXA6P31267 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.14■□□□□ 0.33
HOXA6P31267 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.14■□□□□ 0.33
HOXA6P31267 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.14■□□□□ 0.33
HOXA6P31267 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.14■□□□□ 0.33
HOXA6P31267 CR383656.12-201ENST00000549567 513 ntBASIC17.14■□□□□ 0.33
HOXA6P31267 DUX4L17-201ENST00000557360 1267 ntBASIC17.14■□□□□ 0.33
HOXA6P31267 COX11-202ENST00000571584 1108 ntTSL 2 BASIC17.14■□□□□ 0.33
HOXA6P31267 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.14■□□□□ 0.33
HOXA6P31267 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HOXA6P31267 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.14■□□□□ 0.33
HOXA6P31267 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms