Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TM4SF1P30408 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TM4SF1P30408 KLF2P3-201ENST00000451977 1087 ntBASIC21.6■■□□□ 1.05
TM4SF1P30408 TERF1P3-201ENST00000505638 1227 ntBASIC21.6■■□□□ 1.05
TM4SF1P30408 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
TM4SF1P30408 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC21.6■■□□□ 1.05
TM4SF1P30408 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TM4SF1P30408 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
TM4SF1P30408 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC21.6■■□□□ 1.05
TM4SF1P30408 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TM4SF1P30408 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TM4SF1P30408 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
TM4SF1P30408 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TM4SF1P30408 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TM4SF1P30408 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TM4SF1P30408 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TM4SF1P30408 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC21.6■■□□□ 1.05
TM4SF1P30408 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
TM4SF1P30408 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TM4SF1P30408 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC21.59■■□□□ 1.05
TM4SF1P30408 AKAP8P1-201ENST00000434743 1349 ntBASIC21.59■■□□□ 1.05
TM4SF1P30408 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
TM4SF1P30408 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TM4SF1P30408 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC21.59■■□□□ 1.05
TM4SF1P30408 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
TM4SF1P30408 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TM4SF1P30408 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
TM4SF1P30408 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TM4SF1P30408 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TM4SF1P30408 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TM4SF1P30408 WRB-204ENST00000398753 699 ntTSL 3 BASIC21.59■■□□□ 1.05
TM4SF1P30408 KRT18P32-201ENST00000424695 1287 ntBASIC21.59■■□□□ 1.05
TM4SF1P30408 SPCS2P4-201ENST00000436160 681 ntBASIC21.59■■□□□ 1.05
TM4SF1P30408 RN7SL589P-201ENST00000481268 310 ntBASIC21.59■■□□□ 1.05
TM4SF1P30408 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC21.59■■□□□ 1.05
TM4SF1P30408 MMP17-203ENST00000535004 719 ntTSL 3 BASIC21.59■■□□□ 1.05
TM4SF1P30408 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC21.59■■□□□ 1.05
TM4SF1P30408 DUX4L17-201ENST00000557360 1267 ntBASIC21.59■■□□□ 1.05
TM4SF1P30408 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
TM4SF1P30408 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TM4SF1P30408 AL135744.1-201ENST00000565098 629 ntBASIC21.59■■□□□ 1.05
TM4SF1P30408 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC21.59■■□□□ 1.05
TM4SF1P30408 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TM4SF1P30408 AC012645.4-201ENST00000610691 1061 ntBASIC21.59■■□□□ 1.05
TM4SF1P30408 RAB34-224ENST00000636513 888 ntTSL 5 BASIC21.59■■□□□ 1.05
TM4SF1P30408 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
TM4SF1P30408 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TM4SF1P30408 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TM4SF1P30408 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC21.59■■□□□ 1.05
TM4SF1P30408 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC21.59■■□□□ 1.05
TM4SF1P30408 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
TM4SF1P30408 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC21.59■■□□□ 1.05
TM4SF1P30408 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
TM4SF1P30408 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TM4SF1P30408 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TM4SF1P30408 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TM4SF1P30408 CENPM-205ENST00000404067 905 ntTSL 3 BASIC21.58■■□□□ 1.05
TM4SF1P30408 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC21.58■■□□□ 1.05
TM4SF1P30408 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
TM4SF1P30408 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC21.58■■□□□ 1.05
TM4SF1P30408 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC21.58■■□□□ 1.05
TM4SF1P30408 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
TM4SF1P30408 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC21.58■■□□□ 1.05
TM4SF1P30408 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC21.58■■□□□ 1.05
TM4SF1P30408 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.58■■□□□ 1.05
TM4SF1P30408 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC21.58■■□□□ 1.05
TM4SF1P30408 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
TM4SF1P30408 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC21.58■■□□□ 1.04
TM4SF1P30408 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.04
TM4SF1P30408 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TM4SF1P30408 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC21.57■■□□□ 1.04
TM4SF1P30408 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TM4SF1P30408 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TM4SF1P30408 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TM4SF1P30408 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TM4SF1P30408 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
TM4SF1P30408 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC21.57■■□□□ 1.04
TM4SF1P30408 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
TM4SF1P30408 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
TM4SF1P30408 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC21.57■■□□□ 1.04
TM4SF1P30408 RBPMS2P1-201ENST00000437762 623 ntBASIC21.57■■□□□ 1.04
TM4SF1P30408 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC21.57■■□□□ 1.04
TM4SF1P30408 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC21.57■■□□□ 1.04
TM4SF1P30408 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC21.57■■□□□ 1.04
TM4SF1P30408 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TM4SF1P30408 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC21.57■■□□□ 1.04
TM4SF1P30408 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC21.57■■□□□ 1.04
TM4SF1P30408 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC21.57■■□□□ 1.04
TM4SF1P30408 REXO1L9P-201ENST00000604264 2108 ntBASIC21.57■■□□□ 1.04
TM4SF1P30408 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TM4SF1P30408 AC084121.4-201ENST00000641598 221 ntBASIC21.57■■□□□ 1.04
TM4SF1P30408 AF228730.8-201ENST00000642140 221 ntBASIC21.57■■□□□ 1.04
TM4SF1P30408 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
TM4SF1P30408 FO538757.1-201ENST00000623083 1397 ntBASIC21.57■■□□□ 1.04
TM4SF1P30408 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC21.57■■□□□ 1.04
TM4SF1P30408 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC21.57■■□□□ 1.04
TM4SF1P30408 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC21.57■■□□□ 1.04
TM4SF1P30408 AC046185.3-201ENST00000623228 1824 ntBASIC21.57■■□□□ 1.04
TM4SF1P30408 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
TM4SF1P30408 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms