Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RXRBP28702 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC22.68■■□□□ 1.22
RXRBP28702 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC22.68■■□□□ 1.22
RXRBP28702 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC22.68■■□□□ 1.22
RXRBP28702 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC22.68■■□□□ 1.22
RXRBP28702 FUZ-207ENST00000526575 482 ntTSL 4 BASIC22.68■■□□□ 1.22
RXRBP28702 AC107918.2-201ENST00000530817 355 ntBASIC22.68■■□□□ 1.22
RXRBP28702 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC22.68■■□□□ 1.22
RXRBP28702 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC22.68■■□□□ 1.22
RXRBP28702 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
RXRBP28702 MIR6727-201ENST00000620702 65 ntBASIC22.68■■□□□ 1.22
RXRBP28702 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
RXRBP28702 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
RXRBP28702 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RXRBP28702 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC22.67■■□□□ 1.22
RXRBP28702 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC22.67■■□□□ 1.22
RXRBP28702 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
RXRBP28702 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RXRBP28702 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC22.67■■□□□ 1.22
RXRBP28702 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
RXRBP28702 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC22.67■■□□□ 1.22
RXRBP28702 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC22.67■■□□□ 1.22
RXRBP28702 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC22.67■■□□□ 1.22
RXRBP28702 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC22.67■■□□□ 1.22
RXRBP28702 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC22.67■■□□□ 1.22
RXRBP28702 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
RXRBP28702 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC22.67■■□□□ 1.22
RXRBP28702 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
RXRBP28702 ORC6-206ENST00000568364 888 ntTSL 5 BASIC22.67■■□□□ 1.22
RXRBP28702 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC22.67■■□□□ 1.22
RXRBP28702 AL844908.2-201ENST00000609461 460 ntBASIC22.67■■□□□ 1.22
RXRBP28702 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
RXRBP28702 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC22.67■■□□□ 1.22
RXRBP28702 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC22.67■■□□□ 1.22
RXRBP28702 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
RXRBP28702 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
RXRBP28702 LINC00565-201ENST00000562710 2331 ntBASIC22.66■■□□□ 1.22
RXRBP28702 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC22.66■■□□□ 1.22
RXRBP28702 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
RXRBP28702 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RXRBP28702 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RXRBP28702 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RXRBP28702 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC22.66■■□□□ 1.22
RXRBP28702 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC22.66■■□□□ 1.22
RXRBP28702 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC22.66■■□□□ 1.22
RXRBP28702 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
RXRBP28702 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RXRBP28702 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
RXRBP28702 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC22.66■■□□□ 1.22
RXRBP28702 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC22.66■■□□□ 1.22
RXRBP28702 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC22.66■■□□□ 1.22
RXRBP28702 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC22.66■■□□□ 1.22
RXRBP28702 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC22.66■■□□□ 1.22
RXRBP28702 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
RXRBP28702 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RXRBP28702 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
RXRBP28702 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC22.66■■□□□ 1.22
RXRBP28702 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC22.66■■□□□ 1.22
RXRBP28702 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
RXRBP28702 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RXRBP28702 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
RXRBP28702 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RXRBP28702 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
RXRBP28702 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RXRBP28702 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RXRBP28702 AL023806.1-201ENST00000603994 1649 ntBASIC22.65■■□□□ 1.22
RXRBP28702 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
RXRBP28702 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
RXRBP28702 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
RXRBP28702 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RXRBP28702 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RXRBP28702 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RXRBP28702 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC22.65■■□□□ 1.22
RXRBP28702 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC22.65■■□□□ 1.22
RXRBP28702 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC22.65■■□□□ 1.22
RXRBP28702 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
RXRBP28702 AC109635.5-201ENST00000533593 962 ntBASIC22.65■■□□□ 1.22
RXRBP28702 AC135586.1-201ENST00000539323 574 ntBASIC22.65■■□□□ 1.22
RXRBP28702 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC22.65■■□□□ 1.22
RXRBP28702 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RXRBP28702 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC22.65■■□□□ 1.22
RXRBP28702 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
RXRBP28702 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC22.65■■□□□ 1.22
RXRBP28702 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC22.65■■□□□ 1.22
RXRBP28702 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
RXRBP28702 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC22.65■■□□□ 1.22
RXRBP28702 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC22.65■■□□□ 1.22
RXRBP28702 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
RXRBP28702 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC22.64■■□□□ 1.22
RXRBP28702 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
RXRBP28702 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
RXRBP28702 AL158211.5-201ENST00000623583 2518 ntBASIC22.64■■□□□ 1.22
RXRBP28702 AC005082.1-201ENST00000413042 2259 ntBASIC22.64■■□□□ 1.22
RXRBP28702 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC22.64■■□□□ 1.21
RXRBP28702 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
RXRBP28702 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC22.64■■□□□ 1.21
RXRBP28702 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC22.64■■□□□ 1.21
RXRBP28702 GOLGA2P4-201ENST00000441462 777 ntBASIC22.64■■□□□ 1.21
RXRBP28702 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC22.64■■□□□ 1.21
RXRBP28702 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms