Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NR4A1P22736 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NR4A1P22736 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.34■□□□□ 0.21
NR4A1P22736 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
NR4A1P22736 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
NR4A1P22736 HMGA1P5-201ENST00000412453 271 ntBASIC16.34■□□□□ 0.21
NR4A1P22736 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NR4A1P22736 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.34■□□□□ 0.21
NR4A1P22736 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
NR4A1P22736 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.34■□□□□ 0.21
NR4A1P22736 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC16.34■□□□□ 0.21
NR4A1P22736 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
NR4A1P22736 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.34■□□□□ 0.21
NR4A1P22736 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
NR4A1P22736 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC16.34■□□□□ 0.21
NR4A1P22736 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NR4A1P22736 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
NR4A1P22736 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.34■□□□□ 0.21
NR4A1P22736 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NR4A1P22736 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NR4A1P22736 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.34■□□□□ 0.21
NR4A1P22736 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
NR4A1P22736 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
NR4A1P22736 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
NR4A1P22736 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.34■□□□□ 0.21
NR4A1P22736 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
NR4A1P22736 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.34■□□□□ 0.21
NR4A1P22736 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.34■□□□□ 0.21
NR4A1P22736 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
NR4A1P22736 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC16.33■□□□□ 0.21
NR4A1P22736 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.33■□□□□ 0.21
NR4A1P22736 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
NR4A1P22736 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC16.33■□□□□ 0.21
NR4A1P22736 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
NR4A1P22736 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.33■□□□□ 0.21
NR4A1P22736 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
NR4A1P22736 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NR4A1P22736 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NR4A1P22736 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NR4A1P22736 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
NR4A1P22736 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.33■□□□□ 0.2
NR4A1P22736 AL137013.1-201ENST00000432946 1228 ntBASIC16.33■□□□□ 0.2
NR4A1P22736 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.33■□□□□ 0.2
NR4A1P22736 AP003041.3-201ENST00000527151 707 ntBASIC16.33■□□□□ 0.2
NR4A1P22736 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.33■□□□□ 0.2
NR4A1P22736 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NR4A1P22736 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.33■□□□□ 0.2
NR4A1P22736 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NR4A1P22736 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
NR4A1P22736 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.33■□□□□ 0.2
NR4A1P22736 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NR4A1P22736 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC16.33■□□□□ 0.2
NR4A1P22736 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
NR4A1P22736 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NR4A1P22736 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.33■□□□□ 0.2
NR4A1P22736 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NR4A1P22736 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NR4A1P22736 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NR4A1P22736 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
NR4A1P22736 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.33■□□□□ 0.2
NR4A1P22736 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
NR4A1P22736 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC16.33■□□□□ 0.2
NR4A1P22736 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NR4A1P22736 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NR4A1P22736 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
NR4A1P22736 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
NR4A1P22736 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NR4A1P22736 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NR4A1P22736 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NR4A1P22736 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NR4A1P22736 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NR4A1P22736 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NR4A1P22736 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
NR4A1P22736 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NR4A1P22736 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NR4A1P22736 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NR4A1P22736 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.32■□□□□ 0.2
NR4A1P22736 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NR4A1P22736 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
NR4A1P22736 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
NR4A1P22736 LIN28AP1-201ENST00000429574 405 ntBASIC16.32■□□□□ 0.2
NR4A1P22736 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
NR4A1P22736 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NR4A1P22736 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC16.32■□□□□ 0.2
NR4A1P22736 FAM210CP-201ENST00000445714 574 ntBASIC16.32■□□□□ 0.2
NR4A1P22736 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
NR4A1P22736 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
NR4A1P22736 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
NR4A1P22736 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
NR4A1P22736 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.32■□□□□ 0.2
NR4A1P22736 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.32■□□□□ 0.2
NR4A1P22736 AL136379.1-201ENST00000623471 2642 ntBASIC16.32■□□□□ 0.2
NR4A1P22736 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NR4A1P22736 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NR4A1P22736 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.32■□□□□ 0.2
NR4A1P22736 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NR4A1P22736 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NR4A1P22736 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.31■□□□□ 0.2
NR4A1P22736 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NR4A1P22736 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms