Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
RAB4AP20338 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RAB4AP20338 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
RAB4AP20338 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC13.47□□□□□ -0.25
RAB4AP20338 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAB4AP20338 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAB4AP20338 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC13.46□□□□□ -0.25
RAB4AP20338 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAB4AP20338 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAB4AP20338 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RAB4AP20338 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAB4AP20338 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAB4AP20338 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAB4AP20338 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAB4AP20338 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAB4AP20338 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
RAB4AP20338 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RAB4AP20338 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
RAB4AP20338 MIR638-201ENST00000385237 100 ntBASIC13.46□□□□□ -0.25
RAB4AP20338 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAB4AP20338 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC13.46□□□□□ -0.25
RAB4AP20338 AC006015.1-201ENST00000429970 570 ntBASIC13.46□□□□□ -0.25
RAB4AP20338 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC13.46□□□□□ -0.25
RAB4AP20338 PLD4-205ENST00000553861 667 ntTSL 2 BASIC13.46□□□□□ -0.25
RAB4AP20338 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC13.46□□□□□ -0.25
RAB4AP20338 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAB4AP20338 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC13.46□□□□□ -0.25
RAB4AP20338 MDK-213ENST00000617138 635 ntTSL 2 BASIC13.46□□□□□ -0.25
RAB4AP20338 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC13.46□□□□□ -0.25
RAB4AP20338 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
RAB4AP20338 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAB4AP20338 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAB4AP20338 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RAB4AP20338 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
RAB4AP20338 AC104640.1-201ENST00000562617 2109 ntBASIC13.46□□□□□ -0.26
RAB4AP20338 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
RAB4AP20338 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
RAB4AP20338 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
RAB4AP20338 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
RAB4AP20338 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
RAB4AP20338 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
RAB4AP20338 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
RAB4AP20338 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
RAB4AP20338 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
RAB4AP20338 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.46□□□□□ -0.26
RAB4AP20338 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
RAB4AP20338 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC13.46□□□□□ -0.26
RAB4AP20338 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC13.46□□□□□ -0.26
RAB4AP20338 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAB4AP20338 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAB4AP20338 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAB4AP20338 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.45□□□□□ -0.26
RAB4AP20338 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RAB4AP20338 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAB4AP20338 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RAB4AP20338 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAB4AP20338 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAB4AP20338 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
RAB4AP20338 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
RAB4AP20338 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.45□□□□□ -0.26
RAB4AP20338 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RAB4AP20338 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAB4AP20338 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAB4AP20338 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC13.45□□□□□ -0.26
RAB4AP20338 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAB4AP20338 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAB4AP20338 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
RAB4AP20338 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC13.45□□□□□ -0.26
RAB4AP20338 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.45□□□□□ -0.26
RAB4AP20338 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAB4AP20338 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC13.45□□□□□ -0.26
RAB4AP20338 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
RAB4AP20338 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC13.45□□□□□ -0.26
RAB4AP20338 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAB4AP20338 LGR4-203ENST00000480977 492 ntTSL 2 BASIC13.45□□□□□ -0.26
RAB4AP20338 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAB4AP20338 RHOD-202ENST00000532559 538 ntTSL 3 BASIC13.45□□□□□ -0.26
RAB4AP20338 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC13.45□□□□□ -0.26
RAB4AP20338 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC13.45□□□□□ -0.26
RAB4AP20338 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC13.45□□□□□ -0.26
RAB4AP20338 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
RAB4AP20338 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAB4AP20338 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC13.45□□□□□ -0.26
RAB4AP20338 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RAB4AP20338 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC13.45□□□□□ -0.26
RAB4AP20338 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.45□□□□□ -0.26
RAB4AP20338 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
RAB4AP20338 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
RAB4AP20338 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAB4AP20338 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAB4AP20338 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC13.45□□□□□ -0.26
RAB4AP20338 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAB4AP20338 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAB4AP20338 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAB4AP20338 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
RAB4AP20338 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAB4AP20338 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
RAB4AP20338 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
RAB4AP20338 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
RAB4AP20338 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms