Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AC096582.2-201ENST00000510860 516 ntBASIC17.84■□□□□ 0.45
NFKB1P19838 IGHV3-52-201ENST00000519770 353 ntBASIC17.84■□□□□ 0.45
NFKB1P19838 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
NFKB1P19838 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC17.84■□□□□ 0.45
NFKB1P19838 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
NFKB1P19838 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
NFKB1P19838 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
NFKB1P19838 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
NFKB1P19838 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.84■□□□□ 0.45
NFKB1P19838 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
NFKB1P19838 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NFKB1P19838 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NFKB1P19838 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NFKB1P19838 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
NFKB1P19838 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
NFKB1P19838 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
NFKB1P19838 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NFKB1P19838 KRT8P10-201ENST00000450021 1447 ntBASIC17.83■□□□□ 0.45
NFKB1P19838 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
NFKB1P19838 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
NFKB1P19838 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
NFKB1P19838 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.83■□□□□ 0.44
NFKB1P19838 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NFKB1P19838 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NFKB1P19838 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC17.83■□□□□ 0.44
NFKB1P19838 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.83■□□□□ 0.44
NFKB1P19838 AC103564.2-201ENST00000432853 1299 ntBASIC17.83■□□□□ 0.44
NFKB1P19838 AC104819.1-201ENST00000504587 486 ntBASIC17.83■□□□□ 0.44
NFKB1P19838 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC17.83■□□□□ 0.44
NFKB1P19838 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.83■□□□□ 0.44
NFKB1P19838 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.83■□□□□ 0.44
NFKB1P19838 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
NFKB1P19838 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.83■□□□□ 0.44
NFKB1P19838 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
NFKB1P19838 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.83■□□□□ 0.44
NFKB1P19838 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NFKB1P19838 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
NFKB1P19838 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
NFKB1P19838 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NFKB1P19838 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
NFKB1P19838 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NFKB1P19838 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
NFKB1P19838 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.83■□□□□ 0.44
NFKB1P19838 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
NFKB1P19838 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.82■□□□□ 0.44
NFKB1P19838 AC080080.1-201ENST00000625121 2420 ntBASIC17.82■□□□□ 0.44
NFKB1P19838 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
NFKB1P19838 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.82■□□□□ 0.44
NFKB1P19838 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NFKB1P19838 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
NFKB1P19838 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NFKB1P19838 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
NFKB1P19838 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
NFKB1P19838 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.82■□□□□ 0.44
NFKB1P19838 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NFKB1P19838 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
NFKB1P19838 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
NFKB1P19838 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
NFKB1P19838 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
NFKB1P19838 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
NFKB1P19838 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.81■□□□□ 0.44
NFKB1P19838 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NFKB1P19838 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
NFKB1P19838 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
NFKB1P19838 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NFKB1P19838 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.81■□□□□ 0.44
NFKB1P19838 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.81■□□□□ 0.44
NFKB1P19838 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NFKB1P19838 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
NFKB1P19838 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
NFKB1P19838 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
NFKB1P19838 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
NFKB1P19838 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.81■□□□□ 0.44
NFKB1P19838 MYCLP1-201ENST00000372451 1075 ntBASIC17.81■□□□□ 0.44
NFKB1P19838 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NFKB1P19838 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.81■□□□□ 0.44
NFKB1P19838 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NFKB1P19838 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC17.81■□□□□ 0.44
NFKB1P19838 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NFKB1P19838 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NFKB1P19838 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
NFKB1P19838 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NFKB1P19838 AC111152.3-201ENST00000569699 673 ntBASIC17.81■□□□□ 0.44
NFKB1P19838 AC092329.2-201ENST00000598402 547 ntBASIC17.81■□□□□ 0.44
NFKB1P19838 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.81■□□□□ 0.44
NFKB1P19838 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC17.81■□□□□ 0.44
NFKB1P19838 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
NFKB1P19838 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NFKB1P19838 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NFKB1P19838 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.81■□□□□ 0.44
NFKB1P19838 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NFKB1P19838 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
NFKB1P19838 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.81■□□□□ 0.44
NFKB1P19838 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.81■□□□□ 0.44
NFKB1P19838 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.81■□□□□ 0.44
NFKB1P19838 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.81■□□□□ 0.44
NFKB1P19838 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
NFKB1P19838 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.8■□□□□ 0.44
NFKB1P19838 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NFKB1P19838 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms