Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CDH1P12830 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.11■□□□□ 0.33
CDH1P12830 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH1P12830 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH1P12830 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDH1P12830 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH1P12830 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH1P12830 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
CDH1P12830 AC096633.1-201ENST00000422446 749 ntBASIC17.11■□□□□ 0.33
CDH1P12830 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDH1P12830 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.11■□□□□ 0.33
CDH1P12830 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.11■□□□□ 0.33
CDH1P12830 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH1P12830 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH1P12830 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDH1P12830 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH1P12830 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.11■□□□□ 0.33
CDH1P12830 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDH1P12830 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.11■□□□□ 0.33
CDH1P12830 AC125634.1-201ENST00000438758 1403 ntBASIC17.11■□□□□ 0.33
CDH1P12830 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH1P12830 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH1P12830 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH1P12830 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDH1P12830 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.11■□□□□ 0.33
CDH1P12830 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH1P12830 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH1P12830 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH1P12830 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDH1P12830 AL355312.1-201ENST00000407115 2176 ntBASIC17.11■□□□□ 0.33
CDH1P12830 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.11■□□□□ 0.33
CDH1P12830 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDH1P12830 AC010460.3-201ENST00000511359 1579 ntBASIC17.11■□□□□ 0.33
CDH1P12830 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CDH1P12830 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
CDH1P12830 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH1P12830 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH1P12830 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDH1P12830 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.1■□□□□ 0.33
CDH1P12830 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH1P12830 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CDH1P12830 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC17.1■□□□□ 0.33
CDH1P12830 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH1P12830 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.1■□□□□ 0.33
CDH1P12830 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.1■□□□□ 0.33
CDH1P12830 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
CDH1P12830 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CDH1P12830 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC17.1■□□□□ 0.33
CDH1P12830 AP000867.3-201ENST00000524675 377 ntBASIC17.1■□□□□ 0.33
CDH1P12830 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.1■□□□□ 0.33
CDH1P12830 AC092329.2-201ENST00000598402 547 ntBASIC17.1■□□□□ 0.33
CDH1P12830 Z69720.1-201ENST00000601483 472 ntBASIC17.1■□□□□ 0.33
CDH1P12830 AL138831.2-201ENST00000606564 490 ntBASIC17.1■□□□□ 0.33
CDH1P12830 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.1■□□□□ 0.33
CDH1P12830 AP001094.4-201ENST00000579008 2176 ntBASIC17.1■□□□□ 0.33
CDH1P12830 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.1■□□□□ 0.33
CDH1P12830 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH1P12830 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH1P12830 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.1■□□□□ 0.33
CDH1P12830 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.1■□□□□ 0.33
CDH1P12830 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH1P12830 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH1P12830 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.1■□□□□ 0.33
CDH1P12830 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH1P12830 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH1P12830 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
CDH1P12830 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CDH1P12830 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDH1P12830 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH1P12830 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
CDH1P12830 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH1P12830 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.09■□□□□ 0.33
CDH1P12830 AC022211.2-201ENST00000585075 2527 ntBASIC17.09■□□□□ 0.33
CDH1P12830 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.09■□□□□ 0.33
CDH1P12830 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH1P12830 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH1P12830 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDH1P12830 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC17.09■□□□□ 0.33
CDH1P12830 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDH1P12830 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH1P12830 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDH1P12830 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.09■□□□□ 0.33
CDH1P12830 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
CDH1P12830 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.09■□□□□ 0.33
CDH1P12830 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.09■□□□□ 0.33
CDH1P12830 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDH1P12830 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH1P12830 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDH1P12830 BX276092.7-203ENST00000637198 1536 ntBASIC17.09■□□□□ 0.33
CDH1P12830 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.09■□□□□ 0.33
CDH1P12830 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH1P12830 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH1P12830 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.09■□□□□ 0.33
CDH1P12830 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.09■□□□□ 0.33
CDH1P12830 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH1P12830 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CDH1P12830 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH1P12830 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.09■□□□□ 0.33
CDH1P12830 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH1P12830 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms