Protein–RNA interactions for Protein: P12270

TPR, Nucleoprotein TPR, humanhuman

Known RBP Predictions only

Length 2,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPRP12270 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC16.34■□□□□ 0.21
TPRP12270 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TPRP12270 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TPRP12270 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TPRP12270 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
TPRP12270 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TPRP12270 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
TPRP12270 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC16.34■□□□□ 0.21
TPRP12270 AC122714.2-201ENST00000502787 707 ntBASIC16.34■□□□□ 0.21
TPRP12270 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.34■□□□□ 0.21
TPRP12270 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC16.34■□□□□ 0.21
TPRP12270 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TPRP12270 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC16.34■□□□□ 0.21
TPRP12270 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.34■□□□□ 0.21
TPRP12270 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TPRP12270 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
TPRP12270 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.33■□□□□ 0.21
TPRP12270 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC16.33■□□□□ 0.21
TPRP12270 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
TPRP12270 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TPRP12270 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
TPRP12270 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.33■□□□□ 0.21
TPRP12270 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TPRP12270 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TPRP12270 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
TPRP12270 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TPRP12270 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TPRP12270 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC16.33■□□□□ 0.2
TPRP12270 RN7SL837P-201ENST00000463010 287 ntBASIC16.33■□□□□ 0.2
TPRP12270 AC099548.2-209ENST00000480264 625 ntBASIC16.33■□□□□ 0.2
TPRP12270 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC16.33■□□□□ 0.2
TPRP12270 MIR6080-201ENST00000617359 66 ntBASIC16.33■□□□□ 0.2
TPRP12270 AL353593.2-201ENST00000602529 1483 ntBASIC16.33■□□□□ 0.2
TPRP12270 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TPRP12270 SDHAP2-201ENST00000455183 2001 ntBASIC16.33■□□□□ 0.2
TPRP12270 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TPRP12270 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
TPRP12270 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.33■□□□□ 0.2
TPRP12270 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TPRP12270 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.33■□□□□ 0.2
TPRP12270 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TPRP12270 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TPRP12270 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC16.33■□□□□ 0.2
TPRP12270 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.33■□□□□ 0.2
TPRP12270 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TPRP12270 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
TPRP12270 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TPRP12270 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TPRP12270 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
TPRP12270 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
TPRP12270 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
TPRP12270 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.33■□□□□ 0.2
TPRP12270 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC16.33■□□□□ 0.2
TPRP12270 AL138828.2-201ENST00000615812 383 ntBASIC16.33■□□□□ 0.2
TPRP12270 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
TPRP12270 AC020907.5-201ENST00000624372 1936 ntBASIC16.32■□□□□ 0.2
TPRP12270 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
TPRP12270 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.32■□□□□ 0.2
TPRP12270 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TPRP12270 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
TPRP12270 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TPRP12270 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TPRP12270 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TPRP12270 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TPRP12270 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
TPRP12270 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC16.32■□□□□ 0.2
TPRP12270 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TPRP12270 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TPRP12270 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.32■□□□□ 0.2
TPRP12270 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TPRP12270 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC16.32■□□□□ 0.2
TPRP12270 AC007389.4-201ENST00000454674 793 ntBASIC16.32■□□□□ 0.2
TPRP12270 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC16.32■□□□□ 0.2
TPRP12270 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC16.32■□□□□ 0.2
TPRP12270 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.32■□□□□ 0.2
TPRP12270 AC132938.5-201ENST00000624980 1813 ntBASIC16.32■□□□□ 0.2
TPRP12270 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TPRP12270 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TPRP12270 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TPRP12270 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.32■□□□□ 0.2
TPRP12270 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
TPRP12270 PI4KAP1-204ENST00000612579 1703 ntBASIC16.32■□□□□ 0.2
TPRP12270 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TPRP12270 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TPRP12270 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TPRP12270 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC16.31■□□□□ 0.2
TPRP12270 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.31■□□□□ 0.2
TPRP12270 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.31■□□□□ 0.2
TPRP12270 RN7SL752P-201ENST00000463779 287 ntBASIC16.31■□□□□ 0.2
TPRP12270 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
TPRP12270 CXCL1P1-201ENST00000502804 216 ntBASIC16.31■□□□□ 0.2
TPRP12270 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC16.31■□□□□ 0.2
TPRP12270 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC16.31■□□□□ 0.2
TPRP12270 AC026120.1-201ENST00000611536 926 ntBASIC16.31■□□□□ 0.2
TPRP12270 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TPRP12270 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
TPRP12270 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TPRP12270 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.31■□□□□ 0.2
TPRP12270 AC099778.1-201ENST00000568593 1911 ntBASIC16.31■□□□□ 0.2
TPRP12270 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 64.6 ms