Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC30.31■■■□□ 2.44
TOP2AP11388 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC30.31■■■□□ 2.44
TOP2AP11388 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
TOP2AP11388 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC30.31■■■□□ 2.44
TOP2AP11388 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC30.31■■■□□ 2.44
TOP2AP11388 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC30.31■■■□□ 2.44
TOP2AP11388 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC30.31■■■□□ 2.44
TOP2AP11388 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC30.31■■■□□ 2.44
TOP2AP11388 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC30.31■■■□□ 2.44
TOP2AP11388 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC30.31■■■□□ 2.44
TOP2AP11388 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC30.31■■■□□ 2.44
TOP2AP11388 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
TOP2AP11388 MIR4515-201ENST00000584082 81 ntBASIC30.31■■■□□ 2.44
TOP2AP11388 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC30.31■■■□□ 2.44
TOP2AP11388 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
TOP2AP11388 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
TOP2AP11388 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
TOP2AP11388 BX323043.1-201ENST00000641006 1765 ntBASIC30.3■■■□□ 2.44
TOP2AP11388 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
TOP2AP11388 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
TOP2AP11388 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC30.3■■■□□ 2.44
TOP2AP11388 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
TOP2AP11388 UGT1A2P-201ENST00000454886 866 ntBASIC30.3■■■□□ 2.44
TOP2AP11388 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC30.3■■■□□ 2.44
TOP2AP11388 DUX4L17-201ENST00000557360 1267 ntBASIC30.3■■■□□ 2.44
TOP2AP11388 AC005412.3-201ENST00000580309 715 ntBASIC30.3■■■□□ 2.44
TOP2AP11388 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC30.3■■■□□ 2.44
TOP2AP11388 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC30.3■■■□□ 2.44
TOP2AP11388 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC30.3■■■□□ 2.44
TOP2AP11388 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
TOP2AP11388 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC30.3■■■□□ 2.44
TOP2AP11388 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC30.3■■■□□ 2.44
TOP2AP11388 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
TOP2AP11388 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC30.3■■■□□ 2.44
TOP2AP11388 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
TOP2AP11388 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
TOP2AP11388 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
TOP2AP11388 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC30.29■■■□□ 2.44
TOP2AP11388 HMGA1P7-201ENST00000406908 502 ntBASIC30.29■■■□□ 2.44
TOP2AP11388 AL671277.1-201ENST00000429656 993 ntBASIC30.29■■■□□ 2.44
TOP2AP11388 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC30.29■■■□□ 2.44
TOP2AP11388 AC109635.5-201ENST00000533593 962 ntBASIC30.29■■■□□ 2.44
TOP2AP11388 LINC01451-201ENST00000623792 534 ntBASIC30.29■■■□□ 2.44
TOP2AP11388 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
TOP2AP11388 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC30.29■■■□□ 2.44
TOP2AP11388 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC30.29■■■□□ 2.44
TOP2AP11388 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC30.29■■■□□ 2.44
TOP2AP11388 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC30.29■■■□□ 2.44
TOP2AP11388 AP000974.1-201ENST00000623909 2387 ntBASIC30.29■■■□□ 2.44
TOP2AP11388 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC30.29■■■□□ 2.44
TOP2AP11388 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
TOP2AP11388 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC30.29■■■□□ 2.44
TOP2AP11388 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
TOP2AP11388 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
TOP2AP11388 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC30.28■■■□□ 2.44
TOP2AP11388 AC092474.2-201ENST00000424288 719 ntBASIC30.28■■■□□ 2.44
TOP2AP11388 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC30.28■■■□□ 2.44
TOP2AP11388 RAB34-224ENST00000636513 888 ntTSL 5 BASIC30.28■■■□□ 2.44
TOP2AP11388 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
TOP2AP11388 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC30.28■■■□□ 2.44
TOP2AP11388 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC30.28■■■□□ 2.44
TOP2AP11388 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC30.28■■■□□ 2.44
TOP2AP11388 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
TOP2AP11388 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
TOP2AP11388 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC30.27■■■□□ 2.44
TOP2AP11388 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
TOP2AP11388 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
TOP2AP11388 CD81-202ENST00000381036 880 ntTSL 3 BASIC30.27■■■□□ 2.44
TOP2AP11388 AC005237.2-201ENST00000434368 219 ntBASIC30.27■■■□□ 2.44
TOP2AP11388 AC125807.1-201ENST00000483097 614 ntBASIC30.27■■■□□ 2.44
TOP2AP11388 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC30.27■■■□□ 2.44
TOP2AP11388 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC30.27■■■□□ 2.44
TOP2AP11388 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
TOP2AP11388 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC30.27■■■□□ 2.44
TOP2AP11388 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
TOP2AP11388 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC30.27■■■□□ 2.44
TOP2AP11388 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
TOP2AP11388 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
TOP2AP11388 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
TOP2AP11388 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
TOP2AP11388 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
TOP2AP11388 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC30.27■■■□□ 2.44
TOP2AP11388 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC30.27■■■□□ 2.44
TOP2AP11388 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC30.27■■■□□ 2.44
TOP2AP11388 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC30.27■■■□□ 2.44
TOP2AP11388 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
TOP2AP11388 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC30.27■■■□□ 2.44
TOP2AP11388 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC30.26■■■□□ 2.44
TOP2AP11388 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.44
TOP2AP11388 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
TOP2AP11388 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC30.26■■■□□ 2.43
TOP2AP11388 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC30.26■■■□□ 2.43
TOP2AP11388 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC30.26■■■□□ 2.43
TOP2AP11388 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
TOP2AP11388 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC30.26■■■□□ 2.43
TOP2AP11388 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
TOP2AP11388 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
TOP2AP11388 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC30.26■■■□□ 2.43
TOP2AP11388 AC236430.1-201ENST00000402231 743 ntBASIC30.26■■■□□ 2.43
TOP2AP11388 AC002472.2-201ENST00000442739 958 ntBASIC30.26■■■□□ 2.43
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms