Protein–RNA interactions for Protein: P10827

THRA, Thyroid hormone receptor alpha, humanhuman

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THRAP10827 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
THRAP10827 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
THRAP10827 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
THRAP10827 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
THRAP10827 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
THRAP10827 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.62■□□□□ 0.41
THRAP10827 FOSL1P1-201ENST00000511041 816 ntBASIC17.62■□□□□ 0.41
THRAP10827 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.62■□□□□ 0.41
THRAP10827 AC091304.2-201ENST00000564639 760 ntBASIC17.62■□□□□ 0.41
THRAP10827 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.62■□□□□ 0.41
THRAP10827 Z69720.1-201ENST00000601483 472 ntBASIC17.62■□□□□ 0.41
THRAP10827 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
THRAP10827 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
THRAP10827 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.62■□□□□ 0.41
THRAP10827 AC233702.3-201ENST00000578656 1387 ntBASIC17.62■□□□□ 0.41
THRAP10827 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
THRAP10827 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.62■□□□□ 0.41
THRAP10827 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
THRAP10827 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
THRAP10827 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
THRAP10827 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.62■□□□□ 0.41
THRAP10827 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
THRAP10827 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
THRAP10827 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.61■□□□□ 0.41
THRAP10827 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.61■□□□□ 0.41
THRAP10827 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.61■□□□□ 0.41
THRAP10827 AC022211.2-201ENST00000585075 2527 ntBASIC17.61■□□□□ 0.41
THRAP10827 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.61■□□□□ 0.41
THRAP10827 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
THRAP10827 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.61■□□□□ 0.41
THRAP10827 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
THRAP10827 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
THRAP10827 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
THRAP10827 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
THRAP10827 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
THRAP10827 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
THRAP10827 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
THRAP10827 KRT17P6-201ENST00000453795 1220 ntBASIC17.61■□□□□ 0.41
THRAP10827 GUSBP12-201ENST00000513727 720 ntBASIC17.61■□□□□ 0.41
THRAP10827 AC074051.2-201ENST00000565115 352 ntBASIC17.61■□□□□ 0.41
THRAP10827 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.61■□□□□ 0.41
THRAP10827 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.61■□□□□ 0.41
THRAP10827 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
THRAP10827 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
THRAP10827 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
THRAP10827 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.61■□□□□ 0.41
THRAP10827 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
THRAP10827 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.61■□□□□ 0.41
THRAP10827 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
THRAP10827 AL163051.1-201ENST00000569214 1512 ntBASIC17.61■□□□□ 0.41
THRAP10827 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
THRAP10827 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
THRAP10827 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
THRAP10827 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
THRAP10827 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
THRAP10827 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.61■□□□□ 0.41
THRAP10827 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
THRAP10827 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
THRAP10827 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
THRAP10827 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
THRAP10827 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
THRAP10827 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.6■□□□□ 0.41
THRAP10827 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.6■□□□□ 0.41
THRAP10827 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
THRAP10827 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
THRAP10827 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
THRAP10827 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
THRAP10827 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
THRAP10827 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
THRAP10827 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
THRAP10827 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
THRAP10827 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
THRAP10827 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
THRAP10827 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
THRAP10827 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.6■□□□□ 0.41
THRAP10827 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.6■□□□□ 0.41
THRAP10827 RN7SL606P-201ENST00000472779 293 ntBASIC17.6■□□□□ 0.41
THRAP10827 KRT18P31-201ENST00000506277 1292 ntBASIC17.6■□□□□ 0.41
THRAP10827 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.6■□□□□ 0.41
THRAP10827 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.6■□□□□ 0.41
THRAP10827 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.6■□□□□ 0.41
THRAP10827 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
THRAP10827 AL353692.3-201ENST00000407031 1396 ntBASIC17.6■□□□□ 0.41
THRAP10827 LINC00167-201ENST00000530583 1419 ntBASIC17.6■□□□□ 0.41
THRAP10827 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
THRAP10827 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
THRAP10827 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
THRAP10827 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
THRAP10827 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.6■□□□□ 0.41
THRAP10827 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
THRAP10827 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
THRAP10827 LINC00602-201ENST00000629776 2065 ntBASIC17.6■□□□□ 0.41
THRAP10827 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
THRAP10827 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
THRAP10827 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
THRAP10827 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
THRAP10827 NKILA-202ENST00000614771 2598 ntBASIC17.6■□□□□ 0.41
THRAP10827 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
THRAP10827 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
THRAP10827 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms