Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 HS6ST1P1-201ENST00000481504 1234 ntBASIC13.71□□□□□ -0.21
CD28P10747 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC13.71□□□□□ -0.21
CD28P10747 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC13.71□□□□□ -0.21
CD28P10747 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD28P10747 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC13.71□□□□□ -0.21
CD28P10747 AC006557.2-201ENST00000592985 1240 ntBASIC13.71□□□□□ -0.21
CD28P10747 COPE-211ENST00000600932 1144 ntTSL 5 BASIC13.71□□□□□ -0.21
CD28P10747 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC13.71□□□□□ -0.21
CD28P10747 AC073592.4-201ENST00000623827 446 ntBASIC13.71□□□□□ -0.21
CD28P10747 AC005593.1-201ENST00000624894 515 ntBASIC13.71□□□□□ -0.21
CD28P10747 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CD28P10747 MED29-202ENST00000594368 1471 ntTSL 2 BASIC13.71□□□□□ -0.21
CD28P10747 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CD28P10747 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC13.71□□□□□ -0.21
CD28P10747 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
CD28P10747 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
CD28P10747 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
CD28P10747 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC13.71□□□□□ -0.22
CD28P10747 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CD28P10747 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC13.71□□□□□ -0.22
CD28P10747 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
CD28P10747 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CD28P10747 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CD28P10747 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CD28P10747 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
CD28P10747 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC13.7□□□□□ -0.22
CD28P10747 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD28P10747 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CD28P10747 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CD28P10747 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC13.7□□□□□ -0.22
CD28P10747 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC13.7□□□□□ -0.22
CD28P10747 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC13.7□□□□□ -0.22
CD28P10747 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD28P10747 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CD28P10747 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD28P10747 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD28P10747 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC13.7□□□□□ -0.22
CD28P10747 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD28P10747 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD28P10747 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC13.7□□□□□ -0.22
CD28P10747 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC13.7□□□□□ -0.22
CD28P10747 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD28P10747 AL020989.1-201ENST00000422979 469 ntBASIC13.7□□□□□ -0.22
CD28P10747 AC009947.1-201ENST00000444350 727 ntBASIC13.7□□□□□ -0.22
CD28P10747 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
CD28P10747 NMU-202ENST00000505262 693 ntTSL 3 BASIC13.7□□□□□ -0.22
CD28P10747 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC13.7□□□□□ -0.22
CD28P10747 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC13.7□□□□□ -0.22
CD28P10747 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CD28P10747 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CD28P10747 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
CD28P10747 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC13.7□□□□□ -0.22
CD28P10747 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC13.7□□□□□ -0.22
CD28P10747 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CD28P10747 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC13.7□□□□□ -0.22
CD28P10747 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CD28P10747 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
CD28P10747 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC13.7□□□□□ -0.22
CD28P10747 SIGLEC16-201ENST00000599858 1437 ntBASIC13.7□□□□□ -0.22
CD28P10747 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD28P10747 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CD28P10747 AC135776.1-201ENST00000319817 2481 ntBASIC13.7□□□□□ -0.22
CD28P10747 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CD28P10747 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD28P10747 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CD28P10747 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD28P10747 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD28P10747 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CD28P10747 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CD28P10747 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CD28P10747 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CD28P10747 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CD28P10747 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CD28P10747 AC093677.2-201ENST00000600169 1863 ntBASIC13.7□□□□□ -0.22
CD28P10747 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD28P10747 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC13.69□□□□□ -0.22
CD28P10747 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD28P10747 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC13.69□□□□□ -0.22
CD28P10747 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD28P10747 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD28P10747 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC13.69□□□□□ -0.22
CD28P10747 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD28P10747 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CD28P10747 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CD28P10747 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CD28P10747 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD28P10747 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD28P10747 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CD28P10747 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CD28P10747 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CD28P10747 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CD28P10747 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC13.69□□□□□ -0.22
CD28P10747 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CD28P10747 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC13.69□□□□□ -0.22
CD28P10747 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC13.69□□□□□ -0.22
CD28P10747 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC13.69□□□□□ -0.22
CD28P10747 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CD28P10747 PRYP5-201ENST00000451909 266 ntBASIC13.69□□□□□ -0.22
CD28P10747 RNA5SP416-201ENST00000516838 111 ntBASIC13.69□□□□□ -0.22
CD28P10747 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms