Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SP9P0CG40 AL590560.3-201ENST00000623350 461 ntBASIC17.1■□□□□ 0.33
SP9P0CG40 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SP9P0CG40 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SP9P0CG40 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SP9P0CG40 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SP9P0CG40 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SP9P0CG40 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SP9P0CG40 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.1■□□□□ 0.33
SP9P0CG40 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SP9P0CG40 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.09■□□□□ 0.33
SP9P0CG40 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SP9P0CG40 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SP9P0CG40 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SP9P0CG40 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SP9P0CG40 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SP9P0CG40 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
SP9P0CG40 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SP9P0CG40 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC17.09■□□□□ 0.33
SP9P0CG40 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SP9P0CG40 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
SP9P0CG40 PTPA-220ENST00000436883 532 ntTSL 4 BASIC17.09■□□□□ 0.33
SP9P0CG40 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC17.09■□□□□ 0.33
SP9P0CG40 AC027369.6-201ENST00000525520 931 ntBASIC17.09■□□□□ 0.33
SP9P0CG40 AC107918.2-201ENST00000530817 355 ntBASIC17.09■□□□□ 0.33
SP9P0CG40 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.09■□□□□ 0.33
SP9P0CG40 MIR4453-201ENST00000584019 89 ntBASIC17.09■□□□□ 0.33
SP9P0CG40 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC17.09■□□□□ 0.33
SP9P0CG40 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.09■□□□□ 0.33
SP9P0CG40 AC100757.3-201ENST00000622361 1406 ntBASIC17.09■□□□□ 0.33
SP9P0CG40 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SP9P0CG40 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.09■□□□□ 0.33
SP9P0CG40 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.09■□□□□ 0.33
SP9P0CG40 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.09■□□□□ 0.33
SP9P0CG40 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SP9P0CG40 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SP9P0CG40 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SP9P0CG40 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
SP9P0CG40 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SP9P0CG40 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SP9P0CG40 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC17.08■□□□□ 0.33
SP9P0CG40 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SP9P0CG40 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SP9P0CG40 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SP9P0CG40 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.33
SP9P0CG40 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.08■□□□□ 0.33
SP9P0CG40 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
SP9P0CG40 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.08■□□□□ 0.32
SP9P0CG40 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SP9P0CG40 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SP9P0CG40 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SP9P0CG40 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SP9P0CG40 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SP9P0CG40 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SP9P0CG40 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
SP9P0CG40 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SP9P0CG40 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC17.08■□□□□ 0.32
SP9P0CG40 SPTLC1P1-201ENST00000447199 261 ntBASIC17.08■□□□□ 0.32
SP9P0CG40 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC17.08■□□□□ 0.32
SP9P0CG40 HILS1-202ENST00000545329 423 ntBASIC17.08■□□□□ 0.32
SP9P0CG40 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC17.08■□□□□ 0.32
SP9P0CG40 AL606495.2-201ENST00000605867 535 ntBASIC17.08■□□□□ 0.32
SP9P0CG40 AC073592.8-201ENST00000624126 511 ntBASIC17.08■□□□□ 0.32
SP9P0CG40 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SP9P0CG40 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SP9P0CG40 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SP9P0CG40 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SP9P0CG40 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SP9P0CG40 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SP9P0CG40 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SP9P0CG40 AC022144.1-201ENST00000602255 1580 ntBASIC17.07■□□□□ 0.32
SP9P0CG40 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.07■□□□□ 0.32
SP9P0CG40 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SP9P0CG40 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SP9P0CG40 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SP9P0CG40 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SP9P0CG40 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SP9P0CG40 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SP9P0CG40 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
SP9P0CG40 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC17.07■□□□□ 0.32
SP9P0CG40 HMGA1P7-201ENST00000406908 502 ntBASIC17.07■□□□□ 0.32
SP9P0CG40 TSSK5P-201ENST00000423978 907 ntBASIC17.07■□□□□ 0.32
SP9P0CG40 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.07■□□□□ 0.32
SP9P0CG40 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC17.07■□□□□ 0.32
SP9P0CG40 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC17.07■□□□□ 0.32
SP9P0CG40 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.07■□□□□ 0.32
SP9P0CG40 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.07■□□□□ 0.32
SP9P0CG40 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.07■□□□□ 0.32
SP9P0CG40 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC17.07■□□□□ 0.32
SP9P0CG40 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.07■□□□□ 0.32
SP9P0CG40 AL009183.1-201ENST00000603760 355 ntBASIC17.07■□□□□ 0.32
SP9P0CG40 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SP9P0CG40 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC17.07■□□□□ 0.32
SP9P0CG40 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.07■□□□□ 0.32
SP9P0CG40 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SP9P0CG40 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SP9P0CG40 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.07■□□□□ 0.32
SP9P0CG40 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC17.07■□□□□ 0.32
SP9P0CG40 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SP9P0CG40 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms