Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.69■□□□□ 0.74
TPM3P06753 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
TPM3P06753 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TPM3P06753 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.69■□□□□ 0.74
TPM3P06753 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TPM3P06753 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
TPM3P06753 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TPM3P06753 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
TPM3P06753 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC19.69■□□□□ 0.74
TPM3P06753 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TPM3P06753 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC19.68■□□□□ 0.74
TPM3P06753 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TPM3P06753 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
TPM3P06753 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TPM3P06753 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.68■□□□□ 0.74
TPM3P06753 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TPM3P06753 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TPM3P06753 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TPM3P06753 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TPM3P06753 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
TPM3P06753 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC19.68■□□□□ 0.74
TPM3P06753 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TPM3P06753 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC19.68■□□□□ 0.74
TPM3P06753 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC19.68■□□□□ 0.74
TPM3P06753 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TPM3P06753 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TPM3P06753 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TPM3P06753 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TPM3P06753 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.68■□□□□ 0.74
TPM3P06753 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.68■□□□□ 0.74
TPM3P06753 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TPM3P06753 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.68■□□□□ 0.74
TPM3P06753 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TPM3P06753 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.68■□□□□ 0.74
TPM3P06753 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.68■□□□□ 0.74
TPM3P06753 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.68■□□□□ 0.74
TPM3P06753 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TPM3P06753 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TPM3P06753 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
TPM3P06753 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TPM3P06753 CA12-203ENST00000422263 2556 ntTSL 2 BASIC19.68■□□□□ 0.74
TPM3P06753 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.68■□□□□ 0.74
TPM3P06753 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TPM3P06753 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TPM3P06753 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
TPM3P06753 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
TPM3P06753 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
TPM3P06753 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TPM3P06753 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TPM3P06753 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TPM3P06753 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.67■□□□□ 0.74
TPM3P06753 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TPM3P06753 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
TPM3P06753 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC19.67■□□□□ 0.74
TPM3P06753 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
TPM3P06753 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
TPM3P06753 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
TPM3P06753 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TPM3P06753 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TPM3P06753 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.67■□□□□ 0.74
TPM3P06753 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.67■□□□□ 0.74
TPM3P06753 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TPM3P06753 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC19.67■□□□□ 0.74
TPM3P06753 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC19.67■□□□□ 0.74
TPM3P06753 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TPM3P06753 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TPM3P06753 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
TPM3P06753 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
TPM3P06753 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
TPM3P06753 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC19.67■□□□□ 0.74
TPM3P06753 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC19.67■□□□□ 0.74
TPM3P06753 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TPM3P06753 AL596257.1-201ENST00000641463 2694 ntBASIC19.67■□□□□ 0.74
TPM3P06753 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TPM3P06753 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
TPM3P06753 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TPM3P06753 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.66■□□□□ 0.74
TPM3P06753 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
TPM3P06753 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC19.66■□□□□ 0.74
TPM3P06753 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
TPM3P06753 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TPM3P06753 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TPM3P06753 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TPM3P06753 ABHD17AP1-201ENST00000358206 933 ntBASIC19.66■□□□□ 0.74
TPM3P06753 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
TPM3P06753 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TPM3P06753 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TPM3P06753 PCDHB17P-201ENST00000539533 2393 ntBASIC19.66■□□□□ 0.74
TPM3P06753 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TPM3P06753 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TPM3P06753 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TPM3P06753 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
TPM3P06753 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TPM3P06753 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TPM3P06753 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC19.66■□□□□ 0.74
TPM3P06753 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
TPM3P06753 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.66■□□□□ 0.74
TPM3P06753 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TPM3P06753 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
TPM3P06753 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms