Protein–RNA interactions for Protein: P04632

CAPNS1, Calpain small subunit 1, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1P04632 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CAPNS1P04632 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
CAPNS1P04632 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.38
CAPNS1P04632 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CAPNS1P04632 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CAPNS1P04632 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CAPNS1P04632 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.45■□□□□ 0.38
CAPNS1P04632 REXO1L9P-201ENST00000604264 2108 ntBASIC17.45■□□□□ 0.38
CAPNS1P04632 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CAPNS1P04632 AC006116.8-202ENST00000587620 1550 ntBASIC17.45■□□□□ 0.38
CAPNS1P04632 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
CAPNS1P04632 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CAPNS1P04632 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.45■□□□□ 0.38
CAPNS1P04632 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
CAPNS1P04632 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CAPNS1P04632 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.45■□□□□ 0.38
CAPNS1P04632 AL353692.3-201ENST00000407031 1396 ntBASIC17.45■□□□□ 0.38
CAPNS1P04632 PAN3-AS1-201ENST00000563843 1351 ntBASIC17.45■□□□□ 0.38
CAPNS1P04632 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CAPNS1P04632 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.45■□□□□ 0.38
CAPNS1P04632 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CAPNS1P04632 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.45■□□□□ 0.38
CAPNS1P04632 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CAPNS1P04632 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CAPNS1P04632 RBM17P3-201ENST00000417687 1192 ntBASIC17.45■□□□□ 0.38
CAPNS1P04632 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.45■□□□□ 0.38
CAPNS1P04632 AC244107.1-201ENST00000442033 332 ntBASIC17.45■□□□□ 0.38
CAPNS1P04632 AP006288.1-201ENST00000446065 395 ntBASIC17.45■□□□□ 0.38
CAPNS1P04632 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.45■□□□□ 0.38
CAPNS1P04632 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.45■□□□□ 0.38
CAPNS1P04632 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CAPNS1P04632 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.45■□□□□ 0.38
CAPNS1P04632 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CAPNS1P04632 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC17.45■□□□□ 0.38
CAPNS1P04632 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC17.45■□□□□ 0.38
CAPNS1P04632 AC068587.9-201ENST00000641814 219 ntBASIC17.45■□□□□ 0.38
CAPNS1P04632 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.45■□□□□ 0.38
CAPNS1P04632 AL118508.1-201ENST00000613502 2345 ntBASIC17.45■□□□□ 0.38
CAPNS1P04632 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CAPNS1P04632 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CAPNS1P04632 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CAPNS1P04632 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
CAPNS1P04632 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CAPNS1P04632 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.45■□□□□ 0.38
CAPNS1P04632 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CAPNS1P04632 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CAPNS1P04632 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CAPNS1P04632 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CAPNS1P04632 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.45■□□□□ 0.38
CAPNS1P04632 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC17.45■□□□□ 0.38
CAPNS1P04632 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CAPNS1P04632 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CAPNS1P04632 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CAPNS1P04632 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.44■□□□□ 0.38
CAPNS1P04632 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
CAPNS1P04632 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CAPNS1P04632 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CAPNS1P04632 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.44■□□□□ 0.38
CAPNS1P04632 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CAPNS1P04632 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC17.44■□□□□ 0.38
CAPNS1P04632 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.44■□□□□ 0.38
CAPNS1P04632 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.44■□□□□ 0.38
CAPNS1P04632 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CAPNS1P04632 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CAPNS1P04632 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CAPNS1P04632 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CAPNS1P04632 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CAPNS1P04632 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.44■□□□□ 0.38
CAPNS1P04632 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC17.44■□□□□ 0.38
CAPNS1P04632 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CAPNS1P04632 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CAPNS1P04632 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CAPNS1P04632 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CAPNS1P04632 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
CAPNS1P04632 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CAPNS1P04632 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CAPNS1P04632 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.44■□□□□ 0.38
CAPNS1P04632 AP001269.4-201ENST00000609611 512 ntBASIC17.44■□□□□ 0.38
CAPNS1P04632 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CAPNS1P04632 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.44■□□□□ 0.38
CAPNS1P04632 AP001094.4-201ENST00000579008 2176 ntBASIC17.44■□□□□ 0.38
CAPNS1P04632 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CAPNS1P04632 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CAPNS1P04632 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CAPNS1P04632 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CAPNS1P04632 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CAPNS1P04632 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.44■□□□□ 0.38
CAPNS1P04632 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CAPNS1P04632 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CAPNS1P04632 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CAPNS1P04632 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CAPNS1P04632 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.44■□□□□ 0.38
CAPNS1P04632 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CAPNS1P04632 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CAPNS1P04632 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CAPNS1P04632 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
CAPNS1P04632 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CAPNS1P04632 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.43■□□□□ 0.38
CAPNS1P04632 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CAPNS1P04632 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms