Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 AL359075.1-203ENST00000462729 1002 ntBASIC15.78■□□□□ 0.12
HLA-DQA2P01906 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC15.78■□□□□ 0.12
HLA-DQA2P01906 LITAF-220ENST00000620789 692 ntTSL 5 BASIC15.78■□□□□ 0.12
HLA-DQA2P01906 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC15.78■□□□□ 0.12
HLA-DQA2P01906 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DQA2P01906 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DQA2P01906 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
HLA-DQA2P01906 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DQA2P01906 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
HLA-DQA2P01906 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.78■□□□□ 0.12
HLA-DQA2P01906 AC080080.1-201ENST00000625121 2420 ntBASIC15.78■□□□□ 0.12
HLA-DQA2P01906 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DQA2P01906 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.78■□□□□ 0.12
HLA-DQA2P01906 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DQA2P01906 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
HLA-DQA2P01906 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
HLA-DQA2P01906 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DQA2P01906 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
HLA-DQA2P01906 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DQA2P01906 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
HLA-DQA2P01906 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.78■□□□□ 0.12
HLA-DQA2P01906 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
HLA-DQA2P01906 PRORSD1P-202ENST00000563365 2154 ntBASIC15.77■□□□□ 0.12
HLA-DQA2P01906 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HLA-DQA2P01906 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
HLA-DQA2P01906 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.12
HLA-DQA2P01906 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HLA-DQA2P01906 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HLA-DQA2P01906 KRT8P47-201ENST00000604727 1398 ntBASIC15.77■□□□□ 0.12
HLA-DQA2P01906 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
HLA-DQA2P01906 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
HLA-DQA2P01906 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC15.77■□□□□ 0.12
HLA-DQA2P01906 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC15.77■□□□□ 0.12
HLA-DQA2P01906 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC15.77■□□□□ 0.12
HLA-DQA2P01906 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HLA-DQA2P01906 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HLA-DQA2P01906 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.77■□□□□ 0.12
HLA-DQA2P01906 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HLA-DQA2P01906 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HLA-DQA2P01906 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HLA-DQA2P01906 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC15.77■□□□□ 0.12
HLA-DQA2P01906 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC15.77■□□□□ 0.12
HLA-DQA2P01906 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HLA-DQA2P01906 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
HLA-DQA2P01906 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
HLA-DQA2P01906 AC005521.1-201ENST00000393351 872 ntBASIC15.77■□□□□ 0.12
HLA-DQA2P01906 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
HLA-DQA2P01906 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.77■□□□□ 0.12
HLA-DQA2P01906 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.77■□□□□ 0.12
HLA-DQA2P01906 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.77■□□□□ 0.12
HLA-DQA2P01906 HLA-F-220ENST00000434407 884 ntBASIC15.77■□□□□ 0.12
HLA-DQA2P01906 SNX5-210ENST00000481323 562 ntTSL 3 BASIC15.77■□□□□ 0.12
HLA-DQA2P01906 AC092597.1-201ENST00000487352 616 ntBASIC15.77■□□□□ 0.12
HLA-DQA2P01906 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
HLA-DQA2P01906 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC15.77■□□□□ 0.12
HLA-DQA2P01906 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.77■□□□□ 0.12
HLA-DQA2P01906 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
HLA-DQA2P01906 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
HLA-DQA2P01906 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HLA-DQA2P01906 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HLA-DQA2P01906 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HLA-DQA2P01906 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
HLA-DQA2P01906 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
HLA-DQA2P01906 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.77■□□□□ 0.11
HLA-DQA2P01906 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC15.77■□□□□ 0.11
HLA-DQA2P01906 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
HLA-DQA2P01906 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.77■□□□□ 0.11
HLA-DQA2P01906 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HLA-DQA2P01906 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.77■□□□□ 0.11
HLA-DQA2P01906 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
HLA-DQA2P01906 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HLA-DQA2P01906 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC15.77■□□□□ 0.11
HLA-DQA2P01906 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HLA-DQA2P01906 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HLA-DQA2P01906 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.77■□□□□ 0.11
HLA-DQA2P01906 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
HLA-DQA2P01906 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC15.77■□□□□ 0.11
HLA-DQA2P01906 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
HLA-DQA2P01906 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
HLA-DQA2P01906 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.77■□□□□ 0.11
HLA-DQA2P01906 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
HLA-DQA2P01906 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DQA2P01906 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DQA2P01906 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
HLA-DQA2P01906 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
HLA-DQA2P01906 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC15.76■□□□□ 0.11
HLA-DQA2P01906 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DQA2P01906 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DQA2P01906 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DQA2P01906 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC15.76■□□□□ 0.11
HLA-DQA2P01906 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DQA2P01906 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DQA2P01906 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DQA2P01906 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.76■□□□□ 0.11
HLA-DQA2P01906 AC117947.1-201ENST00000427448 529 ntBASIC15.76■□□□□ 0.11
HLA-DQA2P01906 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
HLA-DQA2P01906 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
HLA-DQA2P01906 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC15.76■□□□□ 0.11
HLA-DQA2P01906 KRT18P57-201ENST00000443599 1254 ntBASIC15.76■□□□□ 0.11
HLA-DQA2P01906 AC092647.4-201ENST00000457211 535 ntBASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms