Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TNFP01375 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TNFP01375 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.08■□□□□ 0.32
TNFP01375 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TNFP01375 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.08■□□□□ 0.32
TNFP01375 CRYGEP-201ENST00000412192 528 ntBASIC17.08■□□□□ 0.32
TNFP01375 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
TNFP01375 NMU-202ENST00000505262 693 ntTSL 3 BASIC17.08■□□□□ 0.32
TNFP01375 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.08■□□□□ 0.32
TNFP01375 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC17.08■□□□□ 0.32
TNFP01375 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.08■□□□□ 0.32
TNFP01375 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.08■□□□□ 0.32
TNFP01375 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC17.08■□□□□ 0.32
TNFP01375 AC040169.1-201ENST00000565382 521 ntBASIC17.08■□□□□ 0.32
TNFP01375 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.08■□□□□ 0.32
TNFP01375 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC17.08■□□□□ 0.32
TNFP01375 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TNFP01375 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
TNFP01375 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TNFP01375 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TNFP01375 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TNFP01375 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.08■□□□□ 0.32
TNFP01375 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TNFP01375 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.08■□□□□ 0.32
TNFP01375 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.08■□□□□ 0.32
TNFP01375 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.08■□□□□ 0.32
TNFP01375 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TNFP01375 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.07■□□□□ 0.32
TNFP01375 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TNFP01375 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TNFP01375 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TNFP01375 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TNFP01375 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TNFP01375 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TNFP01375 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
TNFP01375 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.07■□□□□ 0.32
TNFP01375 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TNFP01375 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC17.07■□□□□ 0.32
TNFP01375 IGHV3-65-201ENST00000523210 341 ntBASIC17.07■□□□□ 0.32
TNFP01375 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.07■□□□□ 0.32
TNFP01375 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC17.07■□□□□ 0.32
TNFP01375 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC17.07■□□□□ 0.32
TNFP01375 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17.07■□□□□ 0.32
TNFP01375 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17.07■□□□□ 0.32
TNFP01375 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC17.07■□□□□ 0.32
TNFP01375 AL353135.1-201ENST00000606729 504 ntBASIC17.07■□□□□ 0.32
TNFP01375 AC008667.4-201ENST00000607370 168 ntBASIC17.07■□□□□ 0.32
TNFP01375 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.07■□□□□ 0.32
TNFP01375 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
TNFP01375 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.07■□□□□ 0.32
TNFP01375 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TNFP01375 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
TNFP01375 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
TNFP01375 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
TNFP01375 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TNFP01375 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.07■□□□□ 0.32
TNFP01375 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.07■□□□□ 0.32
TNFP01375 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.06■□□□□ 0.32
TNFP01375 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.06■□□□□ 0.32
TNFP01375 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.06■□□□□ 0.32
TNFP01375 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
TNFP01375 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.06■□□□□ 0.32
TNFP01375 GPR89P-201ENST00000407924 1495 ntBASIC17.06■□□□□ 0.32
TNFP01375 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.06■□□□□ 0.32
TNFP01375 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TNFP01375 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
TNFP01375 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC17.06■□□□□ 0.32
TNFP01375 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.06■□□□□ 0.32
TNFP01375 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TNFP01375 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TNFP01375 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TNFP01375 REXO1L11P-201ENST00000620964 1927 ntBASIC17.06■□□□□ 0.32
TNFP01375 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.06■□□□□ 0.32
TNFP01375 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.06■□□□□ 0.32
TNFP01375 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TNFP01375 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TNFP01375 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TNFP01375 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TNFP01375 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TNFP01375 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.06■□□□□ 0.32
TNFP01375 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TNFP01375 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
TNFP01375 IMP4-203ENST00000409935 958 ntTSL 5 BASIC17.06■□□□□ 0.32
TNFP01375 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.06■□□□□ 0.32
TNFP01375 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.06■□□□□ 0.32
TNFP01375 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.06■□□□□ 0.32
TNFP01375 MIR4751-201ENST00000578027 74 ntBASIC17.06■□□□□ 0.32
TNFP01375 AC064836.3-201ENST00000607928 673 ntBASIC17.06■□□□□ 0.32
TNFP01375 AC139530.3-201ENST00000620344 690 ntBASIC17.06■□□□□ 0.32
TNFP01375 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.06■□□□□ 0.32
TNFP01375 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TNFP01375 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.06■□□□□ 0.32
TNFP01375 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
TNFP01375 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
TNFP01375 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
TNFP01375 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TNFP01375 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC17.06■□□□□ 0.32
TNFP01375 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
TNFP01375 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
TNFP01375 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms